Protein : Qrob_P0038730.2 Q. robur
Protein Identifier  ? Qrob_P0038730.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=50) K01051 - pectinesterase [EC:3.1.1.11] Code Enzyme  EC:3.1.1.11
Gene Prediction Quality  validated Protein length 

Sequence

Length: 478  
Kegg Orthology  K01051
Paste the following link
Lists
This Protein isn't in any lists. Upload a list.

Sequence Feature Displayer

Protein Sequence Displayer

J Browse Displayer

0 Synonyms

4 GO Terms

Identifier Name Description
GO:0005618 cell wall The rigid or semi-rigid envelope lying outside the cell membrane of plant, fungal, most prokaryotic cells and some protozoan parasites, maintaining their shape and protecting them from osmotic lysis. In plants it is made of cellulose and, often, lignin; in fungi it is composed largely of polysaccharides; in bacteria it is composed of peptidoglycan; in protozoan parasites such as Giardia species, it's made of carbohydrates and proteins.
GO:0030599 pectinesterase activity Catalysis of the reaction: pectin + n H2O = n methanol + pectate.
GO:0042545 cell wall modification The series of events leading to chemical and structural alterations of an existing cell wall that can result in loosening, increased extensibility or disassembly.
GO:0004857 enzyme inhibitor activity Binds to and stops, prevents or reduces the activity of an enzyme.

40 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|cmo:103490630 4 475 + 472 Gaps:31 86.28 576 45.67 2e-142 pectinesterase/pectinesterase inhibitor PPE8B-like
blastp_kegg lcl|csv:101207185 31 475 + 445 Gaps:29 92.31 507 46.79 2e-140 pectinesterase/pectinesterase inhibitor PPE8B-like
blastp_kegg lcl|vvi:100233113 31 476 + 446 Gaps:43 90.96 531 46.38 6e-140 pectin methylesterase PME1
blastp_kegg lcl|tcc:TCM_037443 31 476 + 446 Gaps:59 92.24 541 44.89 2e-136 Pectinesterase/pectinesterase inhibitor PPE8B
blastp_kegg lcl|pvu:PHAVU_009G222100g 31 475 + 445 Gaps:35 90.46 524 46.20 2e-135 hypothetical protein
blastp_kegg lcl|sly:101261426 31 475 + 445 Gaps:62 92.61 541 45.51 2e-135 pectinesterase/pectinesterase inhibitor PPE8B-like
blastp_kegg lcl|pxb:103950217 18 475 + 458 Gaps:37 95.28 509 45.77 2e-134 PME4 pectinesterase/pectinesterase inhibitor PPE8B-like
blastp_kegg lcl|sot:102587467 31 476 + 446 Gaps:62 93.31 538 45.22 2e-134 pectinesterase/pectinesterase inhibitor PPE8B-like
blastp_kegg lcl|mdm:103400887 18 475 + 458 Gaps:37 95.28 509 45.57 3e-134 pectinesterase/pectinesterase inhibitor PPE8B
blastp_kegg lcl|cic:CICLE_v10007993mg 31 475 + 445 Gaps:50 93.14 525 45.19 9e-134 hypothetical protein
blastp_pdb 1gq8_A 182 475 + 294 Gaps:27 100.00 319 43.26 8e-81 mol:protein length:319 PECTINESTERASE
blastp_pdb 1xg2_A 186 475 + 290 Gaps:27 99.37 317 43.49 1e-79 mol:protein length:317 Pectinesterase 1
blastp_pdb 1qjv_B 200 466 + 267 Gaps:92 94.44 342 30.96 8e-23 mol:protein length:342 PECTIN METHYLESTERASE
blastp_pdb 1qjv_A 200 466 + 267 Gaps:92 94.44 342 30.96 8e-23 mol:protein length:342 PECTIN METHYLESTERASE
blastp_pdb 2ntq_B 200 466 + 267 Gaps:92 94.44 342 30.96 8e-23 mol:protein length:342 Pectinesterase A
blastp_pdb 2ntq_A 200 466 + 267 Gaps:92 94.44 342 30.96 8e-23 mol:protein length:342 Pectinesterase A
blastp_pdb 2ntp_B 200 466 + 267 Gaps:92 94.44 342 30.96 8e-23 mol:protein length:342 Pectinesterase A
blastp_pdb 2ntp_A 200 466 + 267 Gaps:92 94.44 342 30.96 8e-23 mol:protein length:342 Pectinesterase A
blastp_pdb 2ntb_B 200 466 + 267 Gaps:92 94.44 342 30.96 8e-23 mol:protein length:342 Pectinesterase A
blastp_pdb 2ntb_A 200 466 + 267 Gaps:92 94.44 342 30.96 8e-23 mol:protein length:342 Pectinesterase A
blastp_uniprot_sprot sp|Q43062|PME_PRUPE 13 471 + 459 Gaps:41 93.87 522 46.12 4e-134 Pectinesterase/pectinesterase inhibitor PPE8B OS Prunus persica PE 2 SV 1
blastp_uniprot_sprot sp|Q9LXK7|PME32_ARATH 2 477 + 476 Gaps:49 98.48 527 42.58 2e-128 Probable pectinesterase/pectinesterase inhibitor 32 OS Arabidopsis thaliana GN PME32 PE 2 SV 1
blastp_uniprot_sprot sp|Q9SMY7|PME44_ARATH 31 475 + 445 Gaps:57 94.48 525 42.74 7e-124 Probable pectinesterase/pectinesterase inhibitor 44 OS Arabidopsis thaliana GN PME44 PE 2 SV 2
blastp_uniprot_sprot sp|O04887|PME2_CITSI 20 475 + 456 Gaps:55 92.35 510 41.83 2e-100 Pectinesterase 2 OS Citrus sinensis GN PECS-2.1 PE 2 SV 1
blastp_uniprot_sprot sp|O22149|PME17_ARATH 20 475 + 456 Gaps:64 91.98 511 42.77 2e-94 Probable pectinesterase/pectinesterase inhibitor 17 OS Arabidopsis thaliana GN PME17 PE 2 SV 2
blastp_uniprot_sprot sp|Q9FHN4|PME60_ARATH 20 475 + 456 Gaps:59 90.93 540 38.90 4e-94 Probable pectinesterase/pectinesterase inhibitor 60 OS Arabidopsis thaliana GN PME60 PE 2 SV 1
blastp_uniprot_sprot sp|Q43143|PMEU1_SOLLC 6 475 + 470 Gaps:67 86.96 583 37.08 5e-94 Pectinesterase/pectinesterase inhibitor U1 OS Solanum lycopersicum GN PMEU1 PE 2 SV 1
blastp_uniprot_sprot sp|P83948|PME3_CITSI 21 475 + 455 Gaps:54 86.13 584 35.59 2e-93 Pectinesterase 3 OS Citrus sinensis PE 1 SV 1
blastp_uniprot_sprot sp|Q9SG77|PME24_ARATH 38 475 + 438 Gaps:54 82.00 561 40.00 5e-93 Putative pectinesterase/pectinesterase inhibitor 24 OS Arabidopsis thaliana GN PME24 PE 3 SV 1
blastp_uniprot_sprot sp|Q43867|PME1_ARATH 42 469 + 428 Gaps:61 81.40 586 35.43 7e-93 Pectinesterase 1 OS Arabidopsis thaliana GN PME1 PE 2 SV 1

16 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 7 18 12 SIGNAL_PEPTIDE_H_REGION none Hydrophobic region of a signal peptide. none
Gene3D 39 163 125 G3DSA:1.20.140.40 "KEGG:00040+3.1.1.11","KEGG:00500+3.1.1.11","MetaCyc:PWY-1081","MetaCyc:PWY-7246","MetaCyc:PWY-7248","UniPathway:UPA00545" none IPR006501
PANTHER 38 477 440 PTHR31707 none none none
ProSitePatterns 214 233 20 PS00800 "KEGG:00040+3.1.1.11","KEGG:00500+3.1.1.11","MetaCyc:PWY-1081","MetaCyc:PWY-7246","MetaCyc:PWY-7248","UniPathway:UPA00545" Pectinesterase signature 1. IPR018040
Phobius 24 477 454 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
SUPERFAMILY 186 473 288 SSF51126 none none IPR011050
SUPERFAMILY 39 162 124 SSF101148 "KEGG:00040+3.1.1.11","KEGG:00500+3.1.1.11","MetaCyc:PWY-1081","MetaCyc:PWY-7246","MetaCyc:PWY-7248","UniPathway:UPA00545" none IPR006501
Phobius 1 6 6 SIGNAL_PEPTIDE_N_REGION none N-terminal region of a signal peptide. none
Pfam 271 461 191 PF01095 "KEGG:00040+3.1.1.11","KEGG:00500+3.1.1.11","MetaCyc:PWY-1081","MetaCyc:PWY-7246","MetaCyc:PWY-7248","UniPathway:UPA00545" Pectinesterase IPR000070
Pfam 41 157 117 PF04043 "KEGG:00040+3.1.1.11","KEGG:00500+3.1.1.11","MetaCyc:PWY-1081","MetaCyc:PWY-7246","MetaCyc:PWY-7248","UniPathway:UPA00545" Plant invertase/pectin methylesterase inhibitor IPR006501
Phobius 19 23 5 SIGNAL_PEPTIDE_C_REGION none C-terminal region of a signal peptide. none
Gene3D 187 472 286 G3DSA:2.160.20.10 none none IPR012334
Phobius 1 23 23 SIGNAL_PEPTIDE none Signal peptide region none
PANTHER 38 477 440 PTHR31707:SF1 none none none
ProSitePatterns 309 318 10 PS00503 "KEGG:00040+3.1.1.11","KEGG:00500+3.1.1.11","MetaCyc:PWY-1081","MetaCyc:PWY-7246","MetaCyc:PWY-7248","UniPathway:UPA00545" Pectinesterase signature 2. IPR018040
SMART 24 158 135 SM00856 "KEGG:00040+3.1.1.11","KEGG:00500+3.1.1.11","MetaCyc:PWY-1081","MetaCyc:PWY-7246","MetaCyc:PWY-7248","UniPathway:UPA00545" Plant invertase/pectin methylesterase inhibitor IPR006501

3 Localization

Analysis Start End Length
SignalP_GRAM_NEGATIVE 1 22 21
SignalP_GRAM_POSITIVE 1 26 25
SignalP_EUK 1 23 22

5 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_vSeqBC_3P Qrob_Chr10 10 s_1A6CK6_610 v_7092_29 4,28 0 23,27 lod 2,8619 7
Bourran2_2015_nEpis_3P Qrob_Chr12 12 s_1AOES6_1466 s_1B0DDG_1094 28,97 28,55 30,1 lod 3.6 8.4
Bourran2_2014_nFork*_3P Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 34,28 7,43 41,48 lod 2,4044 5,5
Bourran2_2015_nP_3P Qrob_Chr12 12 v_10140_295 v_838_303 16 14,69 18,01 lod 5.1 13.7
Bourran1_2004_QTL4_peak_Bud_burst_3P Qrob_Chr04 4 s_1AHUWN_1101 s_1BRNG7_1618 30,55 0 47,55 lod 2,8 7,4

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 23   Secretory pathway 1 0.927 0.036 NON-PLANT 23