Protein : Qrob_P0035400.2 Q. robur
Protein Identifier  ? Qrob_P0035400.2 Organism . Name  Quercus robur
Score  73.0 Score Type  egn
Protein Description  (M=8) PF07716 - Basic region leucine zipper Gene Prediction Quality  validated
Protein length 

Sequence

Length: 99  
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0003700 sequence-specific DNA binding transcription factor activity Interacting selectively and non-covalently with a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex.
GO:0006355 regulation of transcription, DNA-templated Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription.
GO:0043565 sequence-specific DNA binding Interacting selectively and non-covalently with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding.

23 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|gmx:100783826 29 98 + 70 none 36.65 191 80.00 6e-30 transcription factor HY5-like
blastp_kegg lcl|vvi:100261472 29 98 + 70 Gaps:1 34.98 203 83.10 2e-29 transcription factor HY5-like
blastp_kegg lcl|cam:101512390 20 94 + 75 none 39.68 189 76.00 3e-29 transcription factor HY5-like
blastp_kegg lcl|rcu:RCOM_1004100 29 98 + 70 none 40.70 172 80.00 5e-29 Transcription factor HY5 putative
blastp_kegg lcl|gmx:778143 29 98 + 70 none 36.65 191 78.57 7e-29 BZIP69 bZIP transcription factor bZIP69
blastp_kegg lcl|mdm:103423915 29 92 + 64 none 40.25 159 89.06 1e-28 transcription factor HY5-like
blastp_kegg lcl|pper:PRUPE_ppa011967mg 29 91 + 63 none 33.33 189 87.30 3e-28 hypothetical protein
blastp_kegg lcl|pxb:103944715 29 92 + 64 none 29.36 218 89.06 3e-28 transcription factor HY5-like
blastp_kegg lcl|mdm:103452525 29 92 + 64 none 31.53 203 89.06 3e-28 BZIP8 transcription factor HY5-like
blastp_kegg lcl|pmum:103322204 29 91 + 63 none 29.44 214 87.30 5e-28 transcription factor HY5-like
blastp_pdb 2oqq_B 40 79 + 40 none 95.24 42 57.50 5e-09 mol:protein length:42 Transcription factor HY5
blastp_pdb 2oqq_A 40 79 + 40 none 95.24 42 57.50 5e-09 mol:protein length:42 Transcription factor HY5
blastp_pdb 1t2k_D 26 78 + 53 none 86.89 61 37.74 2e-06 mol:protein length:61 Cyclic-AMP-dependent transcription factor ATF
blastp_uniprot_sprot sp|Q8W191|HYH_ARATH 22 87 + 66 none 44.30 149 78.79 4e-28 Transcription factor HY5-like OS Arabidopsis thaliana GN HYH PE 1 SV 1
blastp_uniprot_sprot sp|O24646|HY5_ARATH 22 80 + 59 none 35.12 168 71.19 2e-21 Transcription factor HY5 OS Arabidopsis thaliana GN HY5 PE 1 SV 1
blastp_uniprot_sprot sp|Q9SM50|HY5_SOLLC 22 80 + 59 none 37.34 158 69.49 1e-20 Transcription factor HY5 OS Solanum lycopersicum GN HY5 PE 2 SV 1
blastp_uniprot_sprot sp|Q54WN7|BZPF_DICDI 6 81 + 76 Gaps:10 13.63 631 33.72 2e-07 Probable basic-leucine zipper transcription factor F OS Dictyostelium discoideum GN bzpF PE 3 SV 1
blastp_uniprot_sprot sp|O93602|ATF2_CHICK 8 78 + 71 Gaps:3 15.20 487 36.49 3e-06 Cyclic AMP-dependent transcription factor ATF-2 OS Gallus gallus GN ATF2 PE 2 SV 1
blastp_uniprot_sprot sp|Q5UEM7|CR3L4_RAT 22 73 + 52 none 14.17 367 44.23 4e-06 Cyclic AMP-responsive element-binding protein 3-like protein 4 OS Rattus norvegicus GN Creb3l4 PE 2 SV 1
blastp_uniprot_sprot sp|P16951|ATF2_MOUSE 18 78 + 61 Gaps:3 13.14 487 39.06 4e-06 Cyclic AMP-dependent transcription factor ATF-2 OS Mus musculus GN Atf2 PE 1 SV 2
blastp_uniprot_sprot sp|Q00969|ATF2_RAT 18 78 + 61 Gaps:3 13.14 487 39.06 5e-06 Cyclic AMP-dependent transcription factor ATF-2 OS Rattus norvegicus GN Atf2 PE 2 SV 2
blastp_uniprot_sprot sp|P15336|ATF2_HUMAN 18 78 + 61 Gaps:3 12.67 505 39.06 5e-06 Cyclic AMP-dependent transcription factor ATF-2 OS Homo sapiens GN ATF2 PE 1 SV 4
blastp_uniprot_sprot sp|Q55E93|BZPE_DICDI 9 74 + 66 Gaps:5 16.51 418 40.58 8e-06 Probable basic-leucine zipper transcription factor E OS Dictyostelium discoideum GN bzpE PE 3 SV 1

8 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
ProSiteProfiles 17 80 64 PS50217 none Basic-leucine zipper (bZIP) domain profile. IPR004827
Gene3D 20 79 60 G3DSA:1.20.5.170 none none none
Coils 42 70 29 Coil none none none
SUPERFAMILY 20 78 59 SSF57959 none none none
SMART 15 79 65 SM00338 none basic region leucin zipper IPR004827
Pfam 20 69 50 PF07716 none Basic region leucine zipper IPR004827
ProSitePatterns 22 37 16 PS00036 none Basic-leucine zipper (bZIP) domain signature. IPR004827
PANTHER 20 79 60 PTHR13301 none none none

0 Localization

18 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Champenoux_2015_nPriLBD_3P Qrob_Chr10 10 v_15000_157 v_15000_310 15,68 15,9 15,91 lod 2.4 5.5
Bourran2_2014_nSecLBD_3P Qrob_Chr08 8 s_1BN2OD_551 s_1B5AYF_599 17,17 0 43,51 lod 1,9229 4,4
Bourran2_2014_nLBD*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,25 0 35,55 lod 2,5951 6
Bourran2_2014_nP*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,19 0 31,97 lod 2,8472 6
Bourran2_2002_QTL11_peak_Bud_burst_A4 Qrob_Chr06 6 s_1C41PA_791 s_1AM1AV_1141 19,17 0 34,57 lod 2,3 2,9
Bourran2_2014_aSeqBC_3P Qrob_Chr06 6 v_506_189 v_686_77 30,72 13,58 43,48 lod 2,2746 6,3
Bourran2_2014_aSeqBC*_A4 Qrob_Chr06 6 s_2F5MK3_712 v_444_355 27,13 14,86 39,46 lod 3,7847 9,8
Bourran2_2014_nEpis*_3P Qrob_Chr08 8 s_1DA4QW_688 s_1DNI7D_820 17,96 0 37,75 lod 2,9745 7,5
Bourran2_2014_nEpis*_A4 Qrob_Chr07 7 v_12400_446 s_1BPEBU_1211 6,93 0 15,13 lod 4,7411 11
Bourran2_2014_nFork*_3P Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 34,28 7,43 41,48 lod 2,4044 5,5
Bourran2_2014_nLBD_A4 Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 37,41 9,8 50,1 lod 1,9524 4,1
Bourran2_2014_nPriBD_A4 Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 34,51 3,36 51,86 lod 1,6747 3,9
Bourran2_2014_nPriLBD*_3P Qrob_Chr11 11 v_12066_307 s_1B15GJ_447 3,37 0,57 16,17 lod 3,4299 6,9
Bourran2_2014_nSecLBD_A4 Qrob_Chr07 7 v_8327_222 s_1A4WGY_363 16,04 0 44,69 lod 2,6373 6,5
Bourran2_2014_vEpiBC_A4 Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 37,55 14,41 50,01 lod 1,7882 4,8
Champenoux_2015_nEpis_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,53 25,47 27,72 lod 4.4 8.9
Champenoux_2015_nP_3P Qrob_Chr06 6 s_1A386O_228 s_1AYZFS_603 27,03 26,47 27,34 lod 2.8 7.2
Bourran2_2014_nPriBD*_3P Qrob_Chr06 6 s_1B6WLL_980 v_10064_133 11,49 0 31,52 lod 4,1208 9,1

0 Targeting