Protein : Qrob_P0033170.2 Q. robur
Protein Identifier  ? Qrob_P0033170.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=8) PTHR31985:SF9 - ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF025-RELATED (PTHR31985:SF9) Gene Prediction Quality  validated
Protein length 

Sequence

Length: 222  
Paste the following link
Lists
This Protein isn't in any lists. Upload a list.

Sequence Feature Displayer

Protein Sequence Displayer

J Browse Displayer

0 Synonyms

3 GO Terms

Identifier Name Description
GO:0003700 sequence-specific DNA binding transcription factor activity Interacting selectively and non-covalently with a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex.
GO:0006355 regulation of transcription, DNA-templated Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription.
GO:0003677 DNA binding Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).

26 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pop:POPTR_0003s12120g 56 220 + 165 Gaps:12 99.43 176 53.71 6e-51 POPTRDRAFT_757449 AP2 domain-containing family protein
blastp_kegg lcl|vvi:100250412 54 220 + 167 Gaps:14 75.53 237 53.63 6e-50 ethylene-responsive transcription factor ERF025-like
blastp_kegg lcl|tcc:TCM_015083 54 220 + 167 Gaps:20 64.26 291 50.27 3e-48 Integrase-type DNA-binding superfamily protein putative
blastp_kegg lcl|csv:101204373 61 219 + 159 Gaps:12 67.86 252 52.05 4e-46 ethylene-responsive transcription factor ERF026-like
blastp_kegg lcl|pda:103716877 64 219 + 156 Gaps:17 73.08 234 54.39 1e-45 ethylene-responsive transcription factor ERF027-like
blastp_kegg lcl|cam:101507496 64 219 + 156 Gaps:9 95.32 171 52.15 3e-45 ethylene-responsive transcription factor ERF026-like
blastp_kegg lcl|mus:103984636 68 219 + 152 Gaps:6 70.14 211 58.78 4e-45 ethylene-responsive transcription factor ERF026-like
blastp_kegg lcl|pda:103711129 64 219 + 156 Gaps:22 74.46 231 52.91 4e-44 ethylene-responsive transcription factor ERF027-like
blastp_kegg lcl|mus:103982780 51 219 + 169 Gaps:11 77.59 232 48.89 4e-44 ethylene-responsive transcription factor ERF027
blastp_kegg lcl|sly:101268109 54 219 + 166 Gaps:6 89.89 178 55.62 5e-44 ethylene-responsive transcription factor ERF025-like
blastp_pdb 3gcc_A 63 123 + 61 Gaps:2 90.00 70 49.21 3e-11 mol:protein length:70 ATERF1
blastp_pdb 2gcc_A 63 123 + 61 Gaps:2 90.00 70 49.21 3e-11 mol:protein length:70 ATERF1
blastp_pdb 1gcc_A 66 123 + 58 Gaps:2 95.24 63 50.00 2e-10 mol:protein length:63 ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
blastp_uniprot_sprot sp|Q9FJ90|ERF25_ARATH 57 219 + 163 Gaps:19 76.72 232 51.12 4e-42 Ethylene-responsive transcription factor ERF025 OS Arabidopsis thaliana GN ERF025 PE 2 SV 1
blastp_uniprot_sprot sp|Q9FJ93|DRE1D_ARATH 36 219 + 184 Gaps:27 93.30 224 39.71 1e-35 Dehydration-responsive element-binding protein 1D OS Arabidopsis thaliana GN DREB1D PE 2 SV 1
blastp_uniprot_sprot sp|Q9SYS6|DRE1C_ARATH 42 219 + 178 Gaps:22 92.59 216 40.00 1e-35 Dehydration-responsive element-binding protein 1C OS Arabidopsis thaliana GN DREB1C PE 2 SV 2
blastp_uniprot_sprot sp|Q9CAN9|ERF26_ARATH 68 219 + 152 Gaps:13 64.11 248 54.72 2e-35 Ethylene-responsive transcription factor ERF026 OS Arabidopsis thaliana GN ERF026 PE 2 SV 1
blastp_uniprot_sprot sp|P93835|DRE1B_ARATH 68 219 + 152 Gaps:20 77.93 213 46.99 1e-33 Dehydration-responsive element-binding protein 1B OS Arabidopsis thaliana GN DREB1B PE 2 SV 2
blastp_uniprot_sprot sp|Q9M0L0|DRE1A_ARATH 45 219 + 175 Gaps:24 92.13 216 42.71 4e-32 Dehydration-responsive element-binding protein 1A OS Arabidopsis thaliana GN DREB1A PE 1 SV 2
blastp_uniprot_sprot sp|Q9SJR0|ERF24_ARATH 57 219 + 163 Gaps:17 97.83 184 44.44 2e-31 Ethylene-responsive transcription factor ERF024 OS Arabidopsis thaliana GN ERF024 PE 2 SV 1
blastp_uniprot_sprot sp|Q8S9Z5|DRE1F_ORYSJ 68 200 + 133 Gaps:14 67.12 219 44.90 2e-29 Dehydration-responsive element-binding protein 1F OS Oryza sativa subsp. japonica GN DREB1F PE 3 SV 1
blastp_uniprot_sprot sp|A2WZI4|DRE1F_ORYSI 68 200 + 133 Gaps:14 67.12 219 44.90 2e-29 Dehydration-responsive element-binding protein 1F OS Oryza sativa subsp. indica GN DREB1F PE 2 SV 1
blastp_uniprot_sprot sp|Q38Q39|ERF27_ARATH 68 219 + 152 Gaps:22 90.62 192 43.10 3e-27 Ethylene-responsive transcription factor ERF027 OS Arabidopsis thaliana GN ERF027 PE 2 SV 1
rpsblast_cdd gnl|CDD|197689 67 123 + 57 Gaps:1 90.62 64 55.17 9e-20 smart00380 AP2 DNA-binding domain in plant proteins such as APETALA2 and EREBPs.
rpsblast_cdd gnl|CDD|28902 66 125 + 60 Gaps:1 100.00 61 59.02 5e-17 cd00018 AP2 DNA-binding domain found in transcription regulators in plants such as APETALA2 and EREBP (ethylene responsive element binding protein). In EREBPs the domain specifically binds to the 11bp GCC box of the ethylene response element (ERE) a promotor element essential for ethylene responsiveness. EREBPs and the C-repeat binding factor CBF1 which is involved in stress response contain a single copy of the AP2 domain. APETALA2-like proteins which play a role in plant development contain two copies..
rpsblast_cdd gnl|CDD|201470 66 115 + 50 Gaps:5 100.00 53 41.51 2e-07 pfam00847 AP2 AP2 domain. This 60 amino acid residue domain can bind to DNA and is found in transcription factor proteins.

7 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
SUPERFAMILY 67 124 58 SSF54171 none none IPR016177
PANTHER 19 221 203 PTHR31985:SF9 none none none
Gene3D 67 124 58 G3DSA:3.30.730.10 none none IPR001471
SMART 67 129 63 SM00380 none DNA-binding domain in plant proteins such as APETALA2 and EREBPs IPR001471
PANTHER 19 221 203 PTHR31985 none none none
ProSiteProfiles 67 123 57 PS51032 none AP2/ERF domain profile. IPR001471
Pfam 71 115 45 PF00847 none AP2 domain IPR001471

0 Localization

11 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nSecLBD_3P Qrob_Chr08 8 s_1BN2OD_551 s_1B5AYF_599 17,17 0 43,51 lod 1,9229 4,4
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6
Bourran2_2014_aSeqBC_A4 Qrob_Chr08 8 v_15999_278 v_AP13YL15_395 32,52 4,22 57,22 lod 2,7561 6,7
Bourran2_2014_nFork*_A4 Qrob_Chr08 8 PIE175 s_1CD7GJ_1398 31,22 5,24 57,24 lod 2,6724 6,8
Bourran2_2014_nLBD*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,25 0 35,55 lod 2,5951 6
Bourran2_2014_nP*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,19 0 31,97 lod 2,8472 6
Bourran2_2014_nPriLBD_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,36 0 30,43 lod 2,5806 5,1
Bourran2_2015_rEpiBC_3P Qrob_Chr08 8 s_A9TNV_543 v_11837_70 9,93 9,83 11,15 lod 3.3 7.3
Champenoux_2015_nSeqBC_A4 Qrob_Chr08 8 v_AD7YD13_501 s_1A7IED_780 43,44 43,42 43,99 lod 3.7 8.9
Bourran2_2014_nEpis*_3P Qrob_Chr08 8 s_1DA4QW_688 s_1DNI7D_820 17,96 0 37,75 lod 2,9745 7,5
Bourran2_2014_nPriBD_3P Qrob_Chr11 11 v_11486_194 s_1AT3E_2335 5,54 0,4 20,6 lod 2,6345 5,9

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 20   Mitochondrion 3 0.026 0.776 NON-PLANT 20