Protein : Qrob_P0033130.2 Q. robur
Protein Identifier  ? Qrob_P0033130.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=1) PTHR10024:SF97 - C2 DOMAIN-CONTAINING PROTEIN Gene Prediction Quality  validated
Protein length 

Sequence

Length: 179  
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0 Synonyms

2 GO Terms

Identifier Name Description
GO:0005515 protein binding Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
GO:0006887 exocytosis A process of secretion by a cell that results in the release of intracellular molecules (e.g. hormones, matrix proteins) contained within a membrane-bounded vesicle by fusion of the vesicle with the plasma membrane of a cell. This is the process in which most molecules are secreted from eukaryotic cells.

37 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|atr:s00009p00261310 1 123 + 123 Gaps:3 82.99 147 77.87 2e-60 AMTR_s00009p00261310 hypothetical protein
blastp_kegg lcl|atr:s00009p00261350 1 123 + 123 Gaps:3 82.99 147 72.95 4e-55 AMTR_s00009p00261350 hypothetical protein
blastp_kegg lcl|pda:103698360 1 124 + 124 Gaps:2 82.99 147 70.49 8e-55 elicitor-responsive protein 3-like
blastp_kegg lcl|vvi:100258133 1 124 + 124 Gaps:2 82.99 147 72.13 1e-54 elicitor-responsive protein 3-like
blastp_kegg lcl|tcc:TCM_016210 1 127 + 127 Gaps:3 83.78 148 68.55 4e-54 Elicitor-responsive protein putative
blastp_kegg lcl|gmx:100806391 1 127 + 127 Gaps:5 83.56 146 68.85 9e-54 elicitor-responsive protein 3-like
blastp_kegg lcl|gmx:100782974 1 127 + 127 Gaps:5 83.56 146 67.21 9e-54 elicitor-responsive protein 3-like
blastp_kegg lcl|pop:POPTR_0002s15700g 1 124 + 124 Gaps:2 81.88 149 69.67 2e-53 POPTRDRAFT_411736 C2 domain-containing family protein
blastp_kegg lcl|pmum:103331864 1 124 + 124 Gaps:4 83.44 151 68.25 5e-53 elicitor-responsive protein 3-like
blastp_kegg lcl|pxb:103965561 1 128 + 128 Gaps:4 84.62 156 65.91 7e-52 elicitor-responsive protein 3-like
blastp_pdb 1wfj_A 1 104 + 104 none 76.47 136 64.42 8e-43 mol:protein length:136 putative elicitor-responsive gene
blastp_pdb 3b7y_B 2 100 + 99 Gaps:25 73.20 153 26.79 3e-06 mol:protein length:153 E3 ubiquitin-protein ligase NEDD4
blastp_pdb 3b7y_A 2 100 + 99 Gaps:25 73.20 153 26.79 3e-06 mol:protein length:153 E3 ubiquitin-protein ligase NEDD4
blastp_pdb 2nsq_A 2 69 + 68 Gaps:6 47.74 155 28.38 4e-06 mol:protein length:155 E3 ubiquitin-protein ligase NEDD4-like protei
blastp_uniprot_sprot sp|Q9C8S6|Y1322_ARATH 1 123 + 123 Gaps:4 80.95 147 63.03 6e-47 C2 domain-containing protein At1g63220 OS Arabidopsis thaliana GN At1g63220 PE 1 SV 1
blastp_uniprot_sprot sp|Q0JBH9|ERG3_ORYSJ 1 124 + 124 Gaps:4 83.33 144 60.83 1e-46 Elicitor-responsive protein 3 OS Oryza sativa subsp. japonica GN ERG3 PE 2 SV 1
blastp_uniprot_sprot sp|Q25AG5|ERG3_ORYSI 1 124 + 124 Gaps:4 83.33 144 60.83 1e-46 Elicitor-responsive protein 3 OS Oryza sativa subsp. indica GN ERG3 PE 2 SV 1
blastp_uniprot_sprot sp|Q0JHU5|ERG1_ORYSJ 1 126 + 126 Gaps:17 82.39 159 42.75 7e-25 Elicitor-responsive protein 1 OS Oryza sativa subsp. japonica GN ERG1 PE 2 SV 1
blastp_uniprot_sprot sp|A2WWV5|ERG1_ORYSI 1 126 + 126 Gaps:17 82.39 159 42.75 7e-25 Elicitor-responsive protein 1 OS Oryza sativa subsp. indica GN ERG1 PE 2 SV 2
blastp_uniprot_sprot sp|Q9ZT46|PP16B_CUCMA 1 98 + 98 Gaps:11 78.99 138 34.86 2e-13 16 kDa phloem protein 2 OS Cucurbita maxima GN PP16-2 PE 1 SV 3
blastp_uniprot_sprot sp|Q9ZT47|PP16A_CUCMA 1 98 + 98 Gaps:11 72.67 150 32.11 8e-12 16 kDa phloem protein 1 OS Cucurbita maxima GN PP16-1 PE 1 SV 3
blastp_uniprot_sprot sp|Q9FVJ3|AGD12_ARATH 2 95 + 94 Gaps:8 25.52 337 36.05 7e-10 ADP-ribosylation factor GTPase-activating protein AGD12 OS Arabidopsis thaliana GN AGD12 PE 1 SV 1
blastp_uniprot_sprot sp|Q8L7A4|AGD11_ARATH 2 70 + 69 Gaps:1 17.66 385 39.71 8e-09 Probable ADP-ribosylation factor GTPase-activating protein AGD11 OS Arabidopsis thaliana GN AGD11 PE 2 SV 1
blastp_uniprot_sprot sp|Q8LFN9|AGD13_ARATH 2 95 + 94 Gaps:8 25.60 336 32.56 2e-08 Probable ADP-ribosylation factor GTPase-activating protein AGD13 OS Arabidopsis thaliana GN AGD13 PE 2 SV 1
rpsblast_cdd gnl|CDD|176014 1 99 + 99 Gaps:5 82.26 124 44.12 1e-35 cd04049 C2_putative_Elicitor-responsive_gene C2 domain present in the putative elicitor-responsive gene. In plants elicitor-responsive proteins are triggered in response to specific elicitor molecules such as glycolproteins peptides carbohydrates and lipids. A host of defensive responses are also triggered resulting in localized cell death. Antimicrobial secondary metabolites such as phytoalexins or defense-related proteins including pathogenesis-related (PR) proteins are also produced. There is a single C2 domain present here. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids inositol polyphosphates and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain such as protein kinase C or membrane trafficking proteins which contain at least two C2 domains such as synaptotagmin 1. However there are a few exceptions to this including RIM isoforms and some splice variants of piccolo/aczonin and intersectin which only have a single C2 domain. C2 domains with a calcium binding region have negatively charged residues primarily aspartates that serve as ligands for calcium ions. Members have a type-II topology.
rpsblast_cdd gnl|CDD|175973 1 81 + 81 Gaps:3 80.39 102 35.37 1e-13 cd00030 C2 C2 domain. The C2 domain was first identified in PKC. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids inositol polyphosphates and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain such as protein kinase C or membrane trafficking proteins which contain at least two C2 domains such as synaptotagmin 1. However there are a few exceptions to this including RIM isoforms and some splice variants of piccolo/aczonin and intersectin which only have a single C2 domain. C2 domains with a calcium binding region have negatively charged residues primarily aspartates that serve as ligands for calcium ions.
rpsblast_cdd gnl|CDD|197596 1 77 + 77 Gaps:5 79.21 101 32.50 6e-12 smart00239 C2 Protein kinase C conserved region 2 (CalB). Ca2+-binding motif present in phospholipases protein kinases C and synaptotagmins (among others). Some do not appear to contain Ca2+-binding sites. Particular C2s appear to bind phospholipids inositol polyphosphates and intracellular proteins. Unusual occurrence in perforin. Synaptotagmin and PLC C2s are permuted in sequence with respect to N- and C-terminal beta strands. SMART detects C2 domains using one or both of two profiles.
rpsblast_cdd gnl|CDD|176003 2 69 + 68 Gaps:1 46.21 145 43.28 8e-12 cd04038 C2_ArfGAP C2 domain present in Arf GTPase Activating Proteins (GAP). ArfGAP is a GTPase activating protein which regulates the ADP ribosylation factor Arf a member of the Ras superfamily of GTP-binding proteins. The GTP-bound form of Arf is involved in Golgi morphology and is involved in recruiting coat proteins. ArfGAP is responsible for the GDP-bound form of Arf which is necessary for uncoating the membrane and allowing the Golgi to fuse with an acceptor compartment. These proteins contain an N-terminal ArfGAP domain containing the characteristic zinc finger motif (Cys-x2-Cys-x(16 17)-x2-Cys) and C-terminal C2 domain. C2 domains were first identified in Protein Kinase C (PKC). C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids inositol polyphosphates and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain such as protein kinase C or membrane trafficking proteins which contain at least two C2 domains such as synaptotagmin 1. However there are a few exceptions to this including RIM isoforms and some splice variants of piccolo/aczonin and intersectin which only have a single C2 domain. C2 domains with a calcium binding region have negatively charged residues primarily aspartates that serve as ligands for calcium ions.
rpsblast_cdd gnl|CDD|201052 1 63 + 63 Gaps:5 77.65 85 34.85 2e-09 pfam00168 C2 C2 domain.
rpsblast_cdd gnl|CDD|176009 2 100 + 99 Gaps:3 80.65 124 27.00 5e-08 cd04044 C2A_Tricalbin-like C2 domain first repeat present in Tricalbin-like proteins. 5 to 6 copies of the C2 domain are present in Tricalbin a yeast homolog of Synaptotagmin which is involved in membrane trafficking and sorting. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids inositol polyphosphates and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain such as protein kinase C or membrane trafficking proteins which contain at least two C2 domains such as synaptotagmin 1. However there are a few exceptions to this including RIM isoforms and some splice variants of piccolo/aczonin and intersectin which only have a single C2 domain. C2 domains with a calcium binding region have negatively charged residues primarily aspartates that serve as ligands for calcium ions. This cd contains the first C2 repeat C2A and has a type-II topology.

7 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Pfam 1 63 63 PF00168 none C2 domain IPR000008
PANTHER 1 104 104 PTHR10024 none none none
ProSiteProfiles 1 63 63 PS50004 none C2 domain profile. IPR000008
PANTHER 1 104 104 PTHR10024:SF97 none none IPR015427
Gene3D 1 101 101 G3DSA:2.60.40.150 none none IPR000008
SUPERFAMILY 1 102 102 SSF49562 none none IPR000008
SMART 2 78 77 SM00239 none Protein kinase C conserved region 2 (CalB) IPR000008

0 Localization

11 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nSecLBD_3P Qrob_Chr08 8 s_1BN2OD_551 s_1B5AYF_599 17,17 0 43,51 lod 1,9229 4,4
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6
Bourran2_2014_aSeqBC_A4 Qrob_Chr08 8 v_15999_278 v_AP13YL15_395 32,52 4,22 57,22 lod 2,7561 6,7
Bourran2_2014_nFork*_A4 Qrob_Chr08 8 PIE175 s_1CD7GJ_1398 31,22 5,24 57,24 lod 2,6724 6,8
Bourran2_2014_nLBD*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,25 0 35,55 lod 2,5951 6
Bourran2_2014_nP*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,19 0 31,97 lod 2,8472 6
Bourran2_2014_nPriLBD_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,36 0 30,43 lod 2,5806 5,1
Bourran2_2015_rEpiBC_3P Qrob_Chr08 8 s_A9TNV_543 v_11837_70 9,93 9,83 11,15 lod 3.3 7.3
Champenoux_2015_nSeqBC_A4 Qrob_Chr08 8 v_AD7YD13_501 s_1A7IED_780 43,44 43,42 43,99 lod 3.7 8.9
Bourran2_2014_nEpis*_3P Qrob_Chr08 8 s_1DA4QW_688 s_1DNI7D_820 17,96 0 37,75 lod 2,9745 7,5
Bourran2_2014_nPriBD_3P Qrob_Chr11 11 v_11486_194 s_1AT3E_2335 5,54 0,4 20,6 lod 2,6345 5,9

0 Targeting