| Analysis | rpsblast_cdd | Start | 2 |
| End | 100 | Strand | + |
| Length | 99 | Note | Gaps:3 |
| Hit Coverage | 80.65 | Hit Length | 124 |
| Hit Pident | 27.00 | E Val | 5e-08 |
| Hit Description | cd04044 C2A_Tricalbin-like C2 domain first repeat present in Tricalbin-like proteins. 5 to 6 copies of the C2 domain are present in Tricalbin a yeast homolog of Synaptotagmin which is involved in membrane trafficking and sorting. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids inositol polyphosphates and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain such as protein kinase C or membrane trafficking proteins which contain at least two C2 domains such as synaptotagmin 1. However there are a few exceptions to this including RIM isoforms and some splice variants of piccolo/aczonin and intersectin which only have a single C2 domain. C2 domains with a calcium binding region have negatively charged residues primarily aspartates that serve as ligands for calcium ions. This cd contains the first C2 repeat C2A and has a type-II topology. | Hit Pcons | 16.00 |
| Name | Qrob_P0033130.2 |
| Protein Identifier |
Organism . Name |
Score | Score Type | Protein Description | Alias (in v1) | Code Enzyme | Gene Prediction Quality |
|---|---|---|---|---|---|---|---|
| Qrob_P0033130.2 | Quercus robur | 0.0 | egn | (M=1) PTHR10024:SF97 - C2 DOMAIN-CONTAINING PROTEIN | validated |
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