Protein : Qrob_P0032720.2 Q. robur
Protein Identifier  ? Qrob_P0032720.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Gene Prediction Quality  validated Protein length 

Sequence

Length: 227  
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0 Synonyms

2 GO Terms

Identifier Name Description
GO:0016021 integral component of membrane The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
GO:0022857 transmembrane transporter activity Enables the transfer of a substance from one side of a membrane to the other.

21 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pper:PRUPE_ppa020036mg 10 224 + 215 Gaps:76 67.50 360 55.14 4e-67 hypothetical protein
blastp_kegg lcl|pxb:103936452 10 224 + 215 Gaps:76 68.47 352 56.02 1e-66 WAT1-related protein At5g40230-like
blastp_kegg lcl|pxb:103936432 10 224 + 215 Gaps:76 68.47 352 56.02 1e-66 WAT1-related protein At5g40230-like
blastp_kegg lcl|mdm:103442769 10 225 + 216 Gaps:155 73.89 651 45.11 4e-64 WAT1-related protein At5g40240-like
blastp_kegg lcl|pmum:103330182 10 224 + 215 Gaps:162 67.82 721 44.79 9e-63 uncharacterized LOC103330182
blastp_kegg lcl|fve:101312176 10 224 + 215 Gaps:66 66.38 348 53.68 5e-60 auxin-induced protein 5NG4-like
blastp_kegg lcl|tcc:TCM_016840 10 224 + 215 Gaps:79 67.59 361 50.41 2e-59 Nodulin MtN21 /EamA-like transporter family protein putative isoform 1
blastp_kegg lcl|tcc:TCM_016838 10 224 + 215 Gaps:79 67.59 361 49.59 4e-58 Nodulin MtN21 /EamA-like transporter family protein putative
blastp_kegg lcl|fve:101312465 10 224 + 215 Gaps:63 66.28 347 50.87 1e-56 auxin-induced protein 5NG4-like
blastp_kegg lcl|crb:CARUB_v10007676mg 10 224 + 215 Gaps:74 66.03 365 47.72 2e-56 hypothetical protein
blastp_uniprot_sprot sp|F4KHA8|WTR41_ARATH 10 224 + 215 Gaps:80 66.76 370 46.15 1e-55 WAT1-related protein At5g40230 OS Arabidopsis thaliana GN At5g40230 PE 3 SV 1
blastp_uniprot_sprot sp|Q9FL08|WTR42_ARATH 10 224 + 215 Gaps:82 67.12 368 46.96 3e-55 WAT1-related protein At5g40240 OS Arabidopsis thaliana GN At5g40240 PE 2 SV 1
blastp_uniprot_sprot sp|F4JK59|WTR33_ARATH 11 224 + 214 Gaps:69 67.15 347 45.92 3e-52 WAT1-related protein At4g15540 OS Arabidopsis thaliana GN At4g15540 PE 2 SV 1
blastp_uniprot_sprot sp|Q94JU2|WTR18_ARATH 12 223 + 212 Gaps:76 64.85 367 39.08 4e-36 WAT1-related protein At3g28050 OS Arabidopsis thaliana GN At3g28050 PE 2 SV 1
blastp_uniprot_sprot sp|Q8VYZ7|WTR20_ARATH 14 224 + 211 Gaps:81 67.22 360 38.43 3e-35 WAT1-related protein At3g28070 OS Arabidopsis thaliana GN At3g28070 PE 2 SV 1
blastp_uniprot_sprot sp|Q9LRS5|WTR22_ARATH 14 224 + 211 Gaps:81 68.56 353 38.02 5e-34 WAT1-related protein At3g28100 OS Arabidopsis thaliana GN At3g28100 PE 2 SV 1
blastp_uniprot_sprot sp|Q945L4|WTR40_ARATH 13 224 + 212 Gaps:63 66.37 339 40.89 5e-33 WAT1-related protein At5g40210 OS Arabidopsis thaliana GN At5g40210 PE 2 SV 1
blastp_uniprot_sprot sp|F4IYZ0|WTR21_ARATH 14 224 + 211 Gaps:79 67.60 358 35.54 1e-30 WAT1-related protein At3g28080 OS Arabidopsis thaliana GN At3g28080 PE 2 SV 1
blastp_uniprot_sprot sp|Q56X95|WTR23_ARATH 14 223 + 210 Gaps:81 67.89 355 37.34 3e-30 WAT1-related protein At3g28130 OS Arabidopsis thaliana GN At3g28130 PE 2 SV 1
blastp_uniprot_sprot sp|Q9FL41|WTR38_ARATH 17 224 + 208 Gaps:67 60.95 402 32.24 2e-18 WAT1-related protein At5g07050 OS Arabidopsis thaliana GN At5g07050 PE 2 SV 1
rpsblast_cdd gnl|CDD|177805 14 224 + 211 Gaps:81 67.60 358 38.02 1e-29 PLN00411 PLN00411 nodulin MtN21 family protein Provisional.

15 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 80 98 19 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 27 49 23 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 1 26 26 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
PANTHER 10 139 130 PTHR31218 none none IPR030184
Phobius 99 118 20 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
PANTHER 164 224 61 PTHR31218:SF7 none none none
Phobius 175 193 19 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 218 226 9 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 194 217 24 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 50 60 11 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 61 79 19 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
PANTHER 164 224 61 PTHR31218 none none IPR030184
PANTHER 10 139 130 PTHR31218:SF7 none none none
Phobius 119 147 29 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 148 174 27 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none

5 Localization

Analysis Start End Length
TMHMM 68 90 22
TMHMM 150 172 22
TMHMM 192 214 22
TMHMM 100 122 22
TMHMM 25 47 22

11 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nSecLBD_3P Qrob_Chr08 8 s_1BN2OD_551 s_1B5AYF_599 17,17 0 43,51 lod 1,9229 4,4
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6
Bourran2_2014_aSeqBC_A4 Qrob_Chr08 8 v_15999_278 v_AP13YL15_395 32,52 4,22 57,22 lod 2,7561 6,7
Bourran2_2014_nFork*_A4 Qrob_Chr08 8 PIE175 s_1CD7GJ_1398 31,22 5,24 57,24 lod 2,6724 6,8
Bourran2_2014_nLBD*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,25 0 35,55 lod 2,5951 6
Bourran2_2014_nP*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,19 0 31,97 lod 2,8472 6
Bourran2_2014_nPriLBD_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,36 0 30,43 lod 2,5806 5,1
Bourran2_2015_rEpiBC_3P Qrob_Chr08 8 s_A9TNV_543 v_11837_70 9,93 9,83 11,15 lod 3.3 7.3
Champenoux_2015_nSeqBC_A4 Qrob_Chr08 8 v_AD7YD13_501 s_1A7IED_780 43,44 43,42 43,99 lod 3.7 8.9
Bourran2_2014_nEpis*_3P Qrob_Chr08 8 s_1DA4QW_688 s_1DNI7D_820 17,96 0 37,75 lod 2,9745 7,5
Bourran2_2014_nPriBD_3P Qrob_Chr11 11 v_11486_194 s_1AT3E_2335 5,54 0,4 20,6 lod 2,6345 5,9

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 16   Secretory pathway 5 0.501 0.167 NON-PLANT 16