Protein : Qrob_P0032680.2 Q. robur
Protein Identifier  ? Qrob_P0032680.2 Organism . Name  Quercus robur
Score  98.5 Score Type  egn
Gene Prediction Quality  validated Protein length 

Sequence

Length: 111  
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0 Synonyms

2 GO Terms

Identifier Name Description
GO:0016021 integral component of membrane The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
GO:0022857 transmembrane transporter activity Enables the transfer of a substance from one side of a membrane to the other.

21 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|tcc:TCM_016840 3 105 + 103 Gaps:23 34.90 361 53.17 3e-33 Nodulin MtN21 /EamA-like transporter family protein putative isoform 1
blastp_kegg lcl|tcc:TCM_016838 3 105 + 103 Gaps:23 34.90 361 52.38 2e-32 Nodulin MtN21 /EamA-like transporter family protein putative
blastp_kegg lcl|fve:101312176 1 105 + 105 Gaps:21 36.21 348 50.79 2e-31 auxin-induced protein 5NG4-like
blastp_kegg lcl|tcc:TCM_016837 1 104 + 104 Gaps:21 86.81 144 51.20 3e-31 Nodulin MtN21 /EamA transporter family protein putative
blastp_kegg lcl|tcc:TCM_016835 4 108 + 105 Gaps:21 33.69 374 53.17 4e-31 Nodulin MtN21 /EamA-like transporter family protein isoform 1
blastp_kegg lcl|eus:EUTSA_v10027803mg 1 110 + 110 Gaps:21 35.60 368 48.85 3e-30 hypothetical protein
blastp_kegg lcl|pmum:103330182 1 110 + 110 Gaps:41 34.67 721 44.80 3e-30 uncharacterized LOC103330182
blastp_kegg lcl|ath:AT5G40230 1 110 + 110 Gaps:21 35.41 370 51.91 4e-30 nodulin MtN21 /EamA-like transporter family protein
blastp_kegg lcl|pper:PRUPE_ppa020036mg 1 110 + 110 Gaps:20 36.11 360 49.23 1e-29 hypothetical protein
blastp_kegg lcl|aly:ARALYDRAFT_330483 1 110 + 110 Gaps:21 35.69 367 50.38 3e-29 hypothetical protein
blastp_uniprot_sprot sp|F4KHA8|WTR41_ARATH 1 110 + 110 Gaps:21 35.41 370 51.91 1e-31 WAT1-related protein At5g40230 OS Arabidopsis thaliana GN At5g40230 PE 3 SV 1
blastp_uniprot_sprot sp|Q9FL08|WTR42_ARATH 1 106 + 106 Gaps:21 34.51 368 49.61 6e-30 WAT1-related protein At5g40240 OS Arabidopsis thaliana GN At5g40240 PE 2 SV 1
blastp_uniprot_sprot sp|Q94JU2|WTR18_ARATH 1 106 + 106 Gaps:21 34.60 367 47.24 3e-25 WAT1-related protein At3g28050 OS Arabidopsis thaliana GN At3g28050 PE 2 SV 1
blastp_uniprot_sprot sp|F4JK59|WTR33_ARATH 1 110 + 110 Gaps:21 37.75 347 45.04 7e-25 WAT1-related protein At4g15540 OS Arabidopsis thaliana GN At4g15540 PE 2 SV 1
blastp_uniprot_sprot sp|Q945L4|WTR40_ARATH 13 106 + 94 Gaps:21 33.92 339 44.35 1e-18 WAT1-related protein At5g40210 OS Arabidopsis thaliana GN At5g40210 PE 2 SV 1
blastp_uniprot_sprot sp|Q56X95|WTR23_ARATH 8 106 + 99 Gaps:25 33.80 355 39.17 6e-18 WAT1-related protein At3g28130 OS Arabidopsis thaliana GN At3g28130 PE 2 SV 1
blastp_uniprot_sprot sp|Q9LRS5|WTR22_ARATH 3 106 + 104 Gaps:25 35.41 353 39.20 2e-16 WAT1-related protein At3g28100 OS Arabidopsis thaliana GN At3g28100 PE 2 SV 1
blastp_uniprot_sprot sp|Q8VYZ7|WTR20_ARATH 4 106 + 103 Gaps:23 34.44 360 43.55 5e-15 WAT1-related protein At3g28070 OS Arabidopsis thaliana GN At3g28070 PE 2 SV 1
blastp_uniprot_sprot sp|F4IYZ0|WTR21_ARATH 2 106 + 105 Gaps:23 35.20 358 43.65 2e-13 WAT1-related protein At3g28080 OS Arabidopsis thaliana GN At3g28080 PE 2 SV 1
blastp_uniprot_sprot sp|Q9FL41|WTR38_ARATH 12 105 + 94 Gaps:21 28.61 402 34.78 8e-13 WAT1-related protein At5g07050 OS Arabidopsis thaliana GN At5g07050 PE 2 SV 1
rpsblast_cdd gnl|CDD|177805 2 103 + 102 Gaps:21 34.36 358 45.53 8e-18 PLN00411 PLN00411 nodulin MtN21 family protein Provisional.

9 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PANTHER 1 104 104 PTHR31218:SF7 none none none
Phobius 82 104 23 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 1 11 11 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 63 81 19 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
PANTHER 1 104 104 PTHR31218 none none IPR030184
Phobius 105 110 6 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 12 30 19 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 42 62 21 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 31 41 11 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none

3 Localization

Analysis Start End Length
TMHMM 40 62 22
TMHMM 82 104 22
TMHMM 10 27 17

11 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nSecLBD_3P Qrob_Chr08 8 s_1BN2OD_551 s_1B5AYF_599 17,17 0 43,51 lod 1,9229 4,4
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6
Bourran2_2014_aSeqBC_A4 Qrob_Chr08 8 v_15999_278 v_AP13YL15_395 32,52 4,22 57,22 lod 2,7561 6,7
Bourran2_2014_nFork*_A4 Qrob_Chr08 8 PIE175 s_1CD7GJ_1398 31,22 5,24 57,24 lod 2,6724 6,8
Bourran2_2014_nLBD*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,25 0 35,55 lod 2,5951 6
Bourran2_2014_nP*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,19 0 31,97 lod 2,8472 6
Bourran2_2014_nPriLBD_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,36 0 30,43 lod 2,5806 5,1
Bourran2_2015_rEpiBC_3P Qrob_Chr08 8 s_A9TNV_543 v_11837_70 9,93 9,83 11,15 lod 3.3 7.3
Champenoux_2015_nSeqBC_A4 Qrob_Chr08 8 v_AD7YD13_501 s_1A7IED_780 43,44 43,42 43,99 lod 3.7 8.9
Bourran2_2014_nEpis*_3P Qrob_Chr08 8 s_1DA4QW_688 s_1DNI7D_820 17,96 0 37,75 lod 2,9745 7,5
Bourran2_2014_nPriBD_3P Qrob_Chr11 11 v_11486_194 s_1AT3E_2335 5,54 0,4 20,6 lod 2,6345 5,9

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 22   Secretory pathway 1 0.909 0.044 NON-PLANT 22