Protein : Qrob_P0032670.2 Q. robur
Protein Identifier  ? Qrob_P0032670.2 Organism . Name  Quercus robur
Score  99.1 Score Type  egn
Protein Description  (M=45) PF00892 - EamA-like transporter family Gene Prediction Quality  validated
Protein length 

Sequence

Length: 348  
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0016020 membrane A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
GO:0016021 integral component of membrane The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
GO:0022857 transmembrane transporter activity Enables the transfer of a substance from one side of a membrane to the other.

21 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pper:PRUPE_ppa020036mg 8 343 + 336 Gaps:32 98.33 360 67.23 4e-151 hypothetical protein
blastp_kegg lcl|pmum:103330182 3 343 + 341 Gaps:61 97.78 721 55.60 7e-142 uncharacterized LOC103330182
blastp_kegg lcl|pxb:103936452 1 343 + 343 Gaps:37 100.00 352 65.62 2e-137 WAT1-related protein At5g40230-like
blastp_kegg lcl|pxb:103936432 1 343 + 343 Gaps:37 100.00 352 65.62 2e-137 WAT1-related protein At5g40230-like
blastp_kegg lcl|fve:101312176 3 343 + 341 Gaps:38 99.71 348 61.96 2e-136 auxin-induced protein 5NG4-like
blastp_kegg lcl|gmx:100805667 1 342 + 342 Gaps:23 98.37 367 59.83 3e-136 WAT1-related protein At5g40240-like
blastp_kegg lcl|tcc:TCM_016840 8 342 + 335 Gaps:25 98.06 361 60.73 3e-136 Nodulin MtN21 /EamA-like transporter family protein putative isoform 1
blastp_kegg lcl|eus:EUTSA_v10027803mg 3 342 + 340 Gaps:35 95.92 368 59.77 1e-134 hypothetical protein
blastp_kegg lcl|tcc:TCM_016838 8 342 + 335 Gaps:25 98.06 361 59.89 2e-134 Nodulin MtN21 /EamA-like transporter family protein putative
blastp_kegg lcl|ath:AT5G40230 3 342 + 340 Gaps:35 95.41 370 58.92 6e-132 nodulin MtN21 /EamA-like transporter family protein
blastp_uniprot_sprot sp|F4KHA8|WTR41_ARATH 3 342 + 340 Gaps:35 95.41 370 58.92 2e-133 WAT1-related protein At5g40230 OS Arabidopsis thaliana GN At5g40230 PE 3 SV 1
blastp_uniprot_sprot sp|Q9FL08|WTR42_ARATH 3 342 + 340 Gaps:31 95.92 368 57.22 2e-131 WAT1-related protein At5g40240 OS Arabidopsis thaliana GN At5g40240 PE 2 SV 1
blastp_uniprot_sprot sp|F4JK59|WTR33_ARATH 6 314 + 309 Gaps:31 91.07 347 58.23 5e-105 WAT1-related protein At4g15540 OS Arabidopsis thaliana GN At4g15540 PE 2 SV 1
blastp_uniprot_sprot sp|Q94JU2|WTR18_ARATH 3 342 + 340 Gaps:40 99.18 367 48.90 8e-100 WAT1-related protein At3g28050 OS Arabidopsis thaliana GN At3g28050 PE 2 SV 1
blastp_uniprot_sprot sp|Q945L4|WTR40_ARATH 1 339 + 339 Gaps:43 99.71 339 48.82 2e-89 WAT1-related protein At5g40210 OS Arabidopsis thaliana GN At5g40210 PE 2 SV 1
blastp_uniprot_sprot sp|Q56X95|WTR23_ARATH 1 343 + 343 Gaps:44 100.00 355 43.38 3e-75 WAT1-related protein At3g28130 OS Arabidopsis thaliana GN At3g28130 PE 2 SV 1
blastp_uniprot_sprot sp|Q8VYZ7|WTR20_ARATH 2 343 + 342 Gaps:31 98.61 360 44.79 5e-75 WAT1-related protein At3g28070 OS Arabidopsis thaliana GN At3g28070 PE 2 SV 1
blastp_uniprot_sprot sp|Q9LRS5|WTR22_ARATH 5 335 + 331 Gaps:30 97.73 353 44.64 2e-70 WAT1-related protein At3g28100 OS Arabidopsis thaliana GN At3g28100 PE 2 SV 1
blastp_uniprot_sprot sp|F4IYZ0|WTR21_ARATH 2 343 + 342 Gaps:30 99.44 358 43.54 3e-70 WAT1-related protein At3g28080 OS Arabidopsis thaliana GN At3g28080 PE 2 SV 1
blastp_uniprot_sprot sp|F4I5D5|WTR11_ARATH 9 325 + 317 Gaps:27 90.67 375 34.71 6e-54 WAT1-related protein At1g70260 OS Arabidopsis thaliana GN At1g70260 PE 2 SV 1
rpsblast_cdd gnl|CDD|177805 3 335 + 333 Gaps:30 96.93 358 44.96 2e-67 PLN00411 PLN00411 nodulin MtN21 family protein Provisional.

22 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 310 347 38 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
SUPERFAMILY 227 311 85 SSF103481 none none none
Phobius 233 252 20 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 167 187 21 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 222 232 11 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 125 147 23 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 41 63 23 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 1 40 40 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 64 82 19 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
SUPERFAMILY 50 138 89 SSF103481 none none none
Phobius 284 288 5 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 188 198 11 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 264 283 20 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
PANTHER 1 314 314 PTHR31218:SF7 none none none
Phobius 83 105 23 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Pfam 68 135 68 PF00892 none EamA-like transporter family IPR000620
PANTHER 1 314 314 PTHR31218 none none IPR030184
Phobius 106 124 19 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 148 166 19 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 253 263 11 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 199 221 23 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 289 309 21 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none

8 Localization

Analysis Start End Length
TMHMM 235 257 22
TMHMM 199 220 21
TMHMM 83 105 22
TMHMM 125 147 22
TMHMM 264 283 19
TMHMM 287 309 22
TMHMM 167 186 19
TMHMM 41 63 22

11 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nSecLBD_3P Qrob_Chr08 8 s_1BN2OD_551 s_1B5AYF_599 17,17 0 43,51 lod 1,9229 4,4
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6
Bourran2_2014_aSeqBC_A4 Qrob_Chr08 8 v_15999_278 v_AP13YL15_395 32,52 4,22 57,22 lod 2,7561 6,7
Bourran2_2014_nFork*_A4 Qrob_Chr08 8 PIE175 s_1CD7GJ_1398 31,22 5,24 57,24 lod 2,6724 6,8
Bourran2_2014_nLBD*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,25 0 35,55 lod 2,5951 6
Bourran2_2014_nP*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,19 0 31,97 lod 2,8472 6
Bourran2_2014_nPriLBD_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,36 0 30,43 lod 2,5806 5,1
Bourran2_2015_rEpiBC_3P Qrob_Chr08 8 s_A9TNV_543 v_11837_70 9,93 9,83 11,15 lod 3.3 7.3
Champenoux_2015_nSeqBC_A4 Qrob_Chr08 8 v_AD7YD13_501 s_1A7IED_780 43,44 43,42 43,99 lod 3.7 8.9
Bourran2_2014_nEpis*_3P Qrob_Chr08 8 s_1DA4QW_688 s_1DNI7D_820 17,96 0 37,75 lod 2,9745 7,5
Bourran2_2014_nPriBD_3P Qrob_Chr11 11 v_11486_194 s_1AT3E_2335 5,54 0,4 20,6 lod 2,6345 5,9

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 54   Secretory pathway 5 0.388 0.118 NON-PLANT 54