Protein : Qrob_P0032650.2 Q. robur
Protein Identifier  ? Qrob_P0032650.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Gene Prediction Quality  validated Protein length 

Sequence

Length: 98  
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0 Synonyms

2 GO Terms

Identifier Name Description
GO:0016021 integral component of membrane The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
GO:0022857 transmembrane transporter activity Enables the transfer of a substance from one side of a membrane to the other.

21 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pmum:103330182 1 88 + 88 Gaps:43 30.10 721 53.92 2e-33 uncharacterized LOC103330182
blastp_kegg lcl|pper:PRUPE_ppa020036mg 1 88 + 88 Gaps:21 30.28 360 63.30 2e-33 hypothetical protein
blastp_kegg lcl|tcc:TCM_016840 1 88 + 88 Gaps:22 30.47 361 58.18 2e-31 Nodulin MtN21 /EamA-like transporter family protein putative isoform 1
blastp_kegg lcl|mdm:103416976 1 92 + 92 Gaps:22 80.85 141 52.63 7e-31 WAT1-related protein At3g28050-like
blastp_kegg lcl|eus:EUTSA_v10027803mg 1 87 + 87 Gaps:22 29.62 368 58.72 7e-31 hypothetical protein
blastp_kegg lcl|tcc:TCM_016837 1 88 + 88 Gaps:22 76.39 144 56.36 7e-31 Nodulin MtN21 /EamA transporter family protein putative
blastp_kegg lcl|rcu:RCOM_0851820 1 89 + 89 Gaps:22 83.46 133 57.66 3e-30 hypothetical protein
blastp_kegg lcl|tcc:TCM_016838 1 88 + 88 Gaps:22 30.47 361 56.36 4e-30 Nodulin MtN21 /EamA-like transporter family protein putative
blastp_kegg lcl|fve:101312176 1 91 + 91 Gaps:22 32.47 348 56.64 6e-30 auxin-induced protein 5NG4-like
blastp_kegg lcl|pper:PRUPE_ppa007567mg 1 88 + 88 Gaps:22 30.30 363 55.45 1e-29 hypothetical protein
blastp_uniprot_sprot sp|F4KHA8|WTR41_ARATH 1 88 + 88 Gaps:22 29.73 370 57.27 2e-30 WAT1-related protein At5g40230 OS Arabidopsis thaliana GN At5g40230 PE 3 SV 1
blastp_uniprot_sprot sp|Q9FL08|WTR42_ARATH 1 87 + 87 Gaps:22 29.62 368 57.80 4e-30 WAT1-related protein At5g40240 OS Arabidopsis thaliana GN At5g40240 PE 2 SV 1
blastp_uniprot_sprot sp|Q945L4|WTR40_ARATH 1 88 + 88 Gaps:22 32.45 339 50.91 1e-23 WAT1-related protein At5g40210 OS Arabidopsis thaliana GN At5g40210 PE 2 SV 1
blastp_uniprot_sprot sp|Q94JU2|WTR18_ARATH 1 87 + 87 Gaps:22 29.70 367 55.96 1e-23 WAT1-related protein At3g28050 OS Arabidopsis thaliana GN At3g28050 PE 2 SV 1
blastp_uniprot_sprot sp|F4JK59|WTR33_ARATH 1 87 + 87 Gaps:22 31.41 347 49.54 2e-22 WAT1-related protein At4g15540 OS Arabidopsis thaliana GN At4g15540 PE 2 SV 1
blastp_uniprot_sprot sp|Q56X95|WTR23_ARATH 1 87 + 87 Gaps:24 30.70 355 45.87 3e-19 WAT1-related protein At3g28130 OS Arabidopsis thaliana GN At3g28130 PE 2 SV 1
blastp_uniprot_sprot sp|Q9LRS5|WTR22_ARATH 1 88 + 88 Gaps:22 31.16 353 47.27 3e-14 WAT1-related protein At3g28100 OS Arabidopsis thaliana GN At3g28100 PE 2 SV 1
blastp_uniprot_sprot sp|Q8VYZ7|WTR20_ARATH 1 87 + 87 Gaps:22 30.28 360 48.62 1e-13 WAT1-related protein At3g28070 OS Arabidopsis thaliana GN At3g28070 PE 2 SV 1
blastp_uniprot_sprot sp|Q9FL41|WTR38_ARATH 1 91 + 91 Gaps:24 28.11 402 36.28 2e-12 WAT1-related protein At5g07050 OS Arabidopsis thaliana GN At5g07050 PE 2 SV 1
blastp_uniprot_sprot sp|F4IYZ0|WTR21_ARATH 1 87 + 87 Gaps:22 30.45 358 49.54 3e-12 WAT1-related protein At3g28080 OS Arabidopsis thaliana GN At3g28080 PE 2 SV 1
rpsblast_cdd gnl|CDD|177805 1 87 + 87 Gaps:22 30.45 358 46.79 4e-17 PLN00411 PLN00411 nodulin MtN21 family protein Provisional.

7 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 67 95 29 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 48 66 19 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 96 97 2 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 23 47 25 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
PANTHER 1 88 88 PTHR31218:SF7 none none none
Phobius 1 22 22 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
PANTHER 1 88 88 PTHR31218 none none IPR030184

2 Localization

Analysis Start End Length
TMHMM 25 47 22
TMHMM 73 95 22

11 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nSecLBD_3P Qrob_Chr08 8 s_1BN2OD_551 s_1B5AYF_599 17,17 0 43,51 lod 1,9229 4,4
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6
Bourran2_2014_aSeqBC_A4 Qrob_Chr08 8 v_15999_278 v_AP13YL15_395 32,52 4,22 57,22 lod 2,7561 6,7
Bourran2_2014_nFork*_A4 Qrob_Chr08 8 PIE175 s_1CD7GJ_1398 31,22 5,24 57,24 lod 2,6724 6,8
Bourran2_2014_nLBD*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,25 0 35,55 lod 2,5951 6
Bourran2_2014_nP*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,19 0 31,97 lod 2,8472 6
Bourran2_2014_nPriLBD_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,36 0 30,43 lod 2,5806 5,1
Bourran2_2015_rEpiBC_3P Qrob_Chr08 8 s_A9TNV_543 v_11837_70 9,93 9,83 11,15 lod 3.3 7.3
Champenoux_2015_nSeqBC_A4 Qrob_Chr08 8 v_AD7YD13_501 s_1A7IED_780 43,44 43,42 43,99 lod 3.7 8.9
Bourran2_2014_nEpis*_3P Qrob_Chr08 8 s_1DA4QW_688 s_1DNI7D_820 17,96 0 37,75 lod 2,9745 7,5
Bourran2_2014_nPriBD_3P Qrob_Chr11 11 v_11486_194 s_1AT3E_2335 5,54 0,4 20,6 lod 2,6345 5,9

0 Targeting