Protein : Qrob_P0030200.2 Q. robur
Protein Identifier  ? Qrob_P0030200.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=3) K03512 - DNA polymerase lambda subunit [EC:2.7.7.7 4.2.99.-] Code Enzyme  EC:2.7.7.7
Gene Prediction Quality  validated Protein length 

Sequence

Length: 438  
Kegg Orthology  K03512
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0 Synonyms

5 GO Terms

Identifier Name Description
GO:0003677 DNA binding Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).
GO:0005634 nucleus A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
GO:0006281 DNA repair The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway.
GO:0003887 DNA-directed DNA polymerase activity Catalysis of the reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1); the synthesis of DNA from deoxyribonucleotide triphosphates in the presence of a DNA template and a 3'hydroxyl group.
GO:0034061 DNA polymerase activity Catalysis of the reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1); the synthesis of DNA from deoxyribonucleotide triphosphates in the presence of a nucleic acid template and a 3'hydroxyl group.

35 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|cic:CICLE_v10031184mg 1 371 + 371 Gaps:5 71.62 511 70.77 2e-174 hypothetical protein
blastp_kegg lcl|cit:102620577 1 371 + 371 Gaps:5 68.03 538 70.49 4e-173 DNA polymerase lambda-like
blastp_kegg lcl|vvi:100248348 1 374 + 374 Gaps:4 68.88 543 66.58 6e-172 DNA polymerase lambda-like
blastp_kegg lcl|tcc:TCM_010205 1 370 + 370 Gaps:6 62.01 587 69.51 1e-171 DNA polymerase lambda (POLL) isoform 3
blastp_kegg lcl|gmx:100820492 1 374 + 374 Gaps:11 68.35 534 66.85 6e-162 DNA polymerase lambda-like
blastp_kegg lcl|cam:101499677 1 375 + 375 Gaps:8 68.58 541 62.80 2e-158 DNA polymerase lambda-like
blastp_kegg lcl|pper:PRUPE_ppa018614mg 1 374 + 374 Gaps:45 66.07 501 69.79 1e-154 hypothetical protein
blastp_kegg lcl|mtr:MTR_5g040170 16 374 + 359 Gaps:8 66.85 531 64.79 1e-154 DNA polymerase beta
blastp_kegg lcl|csv:101231078 1 374 + 374 Gaps:26 88.00 400 66.76 1e-153 DNA polymerase lambda-like
blastp_kegg lcl|cmo:103489040 1 374 + 374 Gaps:26 67.56 521 67.61 3e-153 DNA polymerase beta
blastp_pdb 1bpe_A 214 366 + 153 Gaps:3 46.57 335 41.67 3e-28 mol:protein length:335 DNA POLYMERASE BETA
blastp_pdb 2bpg_B 214 366 + 153 Gaps:3 46.57 335 41.67 3e-28 mol:protein length:335 DNA POLYMERASE BETA
blastp_pdb 2bpg_A 214 366 + 153 Gaps:3 46.57 335 41.67 3e-28 mol:protein length:335 DNA POLYMERASE BETA
blastp_pdb 2bpf_A 214 366 + 153 Gaps:3 46.57 335 41.67 3e-28 mol:protein length:335 PROTEIN (DNA POLYMERASE BETA (E.C.2.7.7.7))
blastp_pdb 1huz_B 214 366 + 153 Gaps:3 46.57 335 41.67 3e-28 mol:protein length:335 DNA POLYMERASE BETA
blastp_pdb 1huz_A 214 366 + 153 Gaps:3 46.57 335 41.67 3e-28 mol:protein length:335 DNA POLYMERASE BETA
blastp_pdb 1huo_B 214 366 + 153 Gaps:3 46.57 335 41.67 3e-28 mol:protein length:335 DNA POLYMERASE BETA
blastp_pdb 1huo_A 214 366 + 153 Gaps:3 46.57 335 41.67 3e-28 mol:protein length:335 DNA POLYMERASE BETA
blastp_pdb 1bpd_A 214 366 + 153 Gaps:3 46.57 335 41.67 3e-28 mol:protein length:335 DNA POLYMERASE BETA
blastp_pdb 3ogu_A 214 366 + 153 Gaps:3 46.57 335 41.67 6e-28 mol:protein length:335 DNA polymerase beta
blastp_uniprot_sprot sp|P06766|DPOLB_RAT 214 366 + 153 Gaps:3 46.57 335 41.67 1e-27 DNA polymerase beta OS Rattus norvegicus GN Polb PE 1 SV 4
blastp_uniprot_sprot sp|Q27958|DPOLB_BOVIN 214 366 + 153 Gaps:3 46.57 335 41.03 3e-27 DNA polymerase beta OS Bos taurus GN POLB PE 2 SV 3
blastp_uniprot_sprot sp|P06746|DPOLB_HUMAN 214 366 + 153 Gaps:3 46.57 335 41.03 6e-27 DNA polymerase beta OS Homo sapiens GN POLB PE 1 SV 3
blastp_uniprot_sprot sp|Q8K409|DPOLB_MOUSE 214 366 + 153 Gaps:3 46.57 335 40.38 7e-27 DNA polymerase beta OS Mus musculus GN Polb PE 2 SV 3
blastp_uniprot_sprot sp|Q4R380|DPOLL_MACFA 193 389 + 197 Gaps:4 34.26 575 32.49 3e-26 DNA polymerase lambda OS Macaca fascicularis GN POLL PE 2 SV 1
blastp_uniprot_sprot sp|Q9UGP5|DPOLL_HUMAN 193 389 + 197 Gaps:4 34.26 575 32.49 4e-26 DNA polymerase lambda OS Homo sapiens GN POLL PE 1 SV 1
blastp_uniprot_sprot sp|O57383|DPOLB_XENLA 215 366 + 152 Gaps:3 46.41 334 40.65 6e-26 DNA polymerase beta OS Xenopus laevis GN polb PE 1 SV 3
blastp_uniprot_sprot sp|Q6DRD3|DPOLB_DANRE 214 365 + 152 Gaps:2 45.83 336 40.91 8e-26 DNA polymerase beta OS Danio rerio GN polb PE 2 SV 2
blastp_uniprot_sprot sp|Q9QXE2|DPOLL_MOUSE 17 360 + 344 Gaps:29 62.30 573 25.77 9e-25 DNA polymerase lambda OS Mus musculus GN Poll PE 2 SV 1
blastp_uniprot_sprot sp|Q5RKI3|DPOLL_RAT 193 364 + 172 Gaps:4 30.02 573 32.56 2e-23 DNA polymerase lambda OS Rattus norvegicus GN Poll PE 2 SV 1

14 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PANTHER 13 374 362 PTHR11276 none none none
Gene3D 14 109 96 G3DSA:3.40.50.10190 none none IPR001357
Pfam 299 349 51 PF10391 none Fingers domain of DNA polymerase lambda IPR018944
PRINTS 338 352 15 PR00870 "KEGG:00230+2.7.7.7","KEGG:00240+2.7.7.7" DNA-polymerase family X pol beta-like signature IPR002008
PRINTS 266 283 18 PR00870 "KEGG:00230+2.7.7.7","KEGG:00240+2.7.7.7" DNA-polymerase family X pol beta-like signature IPR002008
SUPERFAMILY 208 291 84 SSF47802 none none IPR010996
ProSiteProfiles 14 108 95 PS50172 none BRCT domain profile. IPR001357
Gene3D 208 293 86 G3DSA:1.10.150.110 none none IPR027421
PANTHER 13 374 362 PTHR11276:SF1 none none none
SMART 213 429 217 SM00483 none DNA polymerase X family IPR002054
SUPERFAMILY 293 348 56 SSF81585 none none none
Gene3D 294 349 56 G3DSA:1.10.150.20 none none none
SUPERFAMILY 12 109 98 SSF52113 none none IPR001357
Pfam 215 280 66 PF14716 none Helix-hairpin-helix domain none

0 Localization

0 Qtllist

0 Targeting