Protein : Qrob_P0011800.2 Q. robur
Protein Identifier  ? Qrob_P0011800.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=1) 3.6.3.7 - Sodium-exporting ATPase. Code Enzyme  EC:3.6.3.7
Gene Prediction Quality  validated Protein length 

Sequence

Length: 1160  
Kegg Orthology  K14950
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0 Synonyms

5 GO Terms

Identifier Name Description
GO:0046872 metal ion binding Interacting selectively and non-covalently with any metal ion.
GO:0016021 integral component of membrane The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
GO:0006812 cation transport The directed movement of cations, atoms or small molecules with a net positive charge, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
GO:0016887 ATPase activity Catalysis of the reaction: ATP + H2O = ADP + phosphate + 2 H+. May or may not be coupled to another reaction.
GO:0000166 nucleotide binding Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose.

47 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|rcu:RCOM_1761870 1 1159 + 1159 Gaps:76 100.00 1193 82.82 0.0 cation-transporting atpase 13a1 putative (EC:3.6.3.8)
blastp_kegg lcl|vvi:100257916 1 1156 + 1156 Gaps:77 99.83 1191 83.26 0.0 probable cation-transporting ATPase-like
blastp_kegg lcl|pxb:103945252 1 1159 + 1159 Gaps:87 100.00 1190 81.85 0.0 probable manganese-transporting ATPase PDR2
blastp_kegg lcl|tcc:TCM_025159 1 1157 + 1157 Gaps:76 99.92 1192 82.70 0.0 P-type ATPase transporter
blastp_kegg lcl|pxb:103926554 1 1159 + 1159 Gaps:88 100.00 1189 81.75 0.0 probable manganese-transporting ATPase PDR2
blastp_kegg lcl|mdm:103453606 1 1159 + 1159 Gaps:88 100.00 1189 81.58 0.0 probable cation-transporting ATPase
blastp_kegg lcl|pmum:103319108 1 1159 + 1159 Gaps:81 100.00 1194 81.66 0.0 probable cation-transporting ATPase
blastp_kegg lcl|cmo:103495641 1 1159 + 1159 Gaps:77 100.00 1192 82.13 0.0 probable cation-transporting ATPase PDR2
blastp_kegg lcl|pper:PRUPE_ppa000424mg 1 1159 + 1159 Gaps:82 100.00 1193 81.56 0.0 hypothetical protein
blastp_kegg lcl|fve:101290795 1 1159 + 1159 Gaps:91 100.00 1184 80.83 0.0 probable cation-transporting ATPase-like
blastp_pdb 3kdp_C 231 795 + 565 Gaps:117 56.91 998 25.70 3e-15 mol:protein length:998 Sodium/potassium-transporting ATPase subunit
blastp_pdb 3kdp_A 231 795 + 565 Gaps:117 56.91 998 25.70 3e-15 mol:protein length:998 Sodium/potassium-transporting ATPase subunit
blastp_pdb 3b8e_C 231 795 + 565 Gaps:117 56.91 998 25.70 3e-15 mol:protein length:998 Sodium/potassium-transporting ATPase subunit
blastp_pdb 3b8e_A 231 795 + 565 Gaps:117 56.91 998 25.70 3e-15 mol:protein length:998 Sodium/potassium-transporting ATPase subunit
blastp_pdb 3n2f_C 231 795 + 565 Gaps:117 57.26 992 25.70 3e-15 mol:protein length:992 Sodium/potassium-transporting ATPase subunit
blastp_pdb 3n2f_A 231 795 + 565 Gaps:117 57.26 992 25.70 3e-15 mol:protein length:992 Sodium/potassium-transporting ATPase subunit
blastp_pdb 3n23_C 231 795 + 565 Gaps:117 57.26 992 25.70 3e-15 mol:protein length:992 Sodium/potassium-transporting ATPase subunit
blastp_pdb 3n23_A 231 795 + 565 Gaps:117 57.26 992 25.70 3e-15 mol:protein length:992 Sodium/potassium-transporting ATPase subunit
blastp_pdb 3ixz_A 231 795 + 565 Gaps:129 54.93 1034 25.35 3e-10 mol:protein length:1034 Potassium-transporting ATPase alpha
blastp_pdb 2xzb_A 231 795 + 565 Gaps:129 54.93 1034 25.35 3e-10 mol:protein length:1034 POTASSIUM-TRANSPORTING ATPASE ALPHA CHAIN 1
blastp_uniprot_sprot sp|Q9LT02|ATY1_ARATH 1 1159 + 1159 Gaps:92 100.00 1179 75.74 0.0 Probable cation-transporting ATPase OS Arabidopsis thaliana GN At5g23630 PE 2 SV 1
blastp_uniprot_sprot sp|Q9HD20|AT131_HUMAN 51 1110 + 1060 Gaps:135 88.95 1204 42.76 0.0 Probable cation-transporting ATPase 13A1 OS Homo sapiens GN ATP13A1 PE 1 SV 2
blastp_uniprot_sprot sp|Q9EPE9|AT131_MOUSE 28 1133 + 1106 Gaps:156 93.83 1200 41.83 0.0 Probable cation-transporting ATPase 13A1 OS Mus musculus GN Atp13a1 PE 2 SV 2
blastp_uniprot_sprot sp|P90747|YE56_CAEEL 23 1133 + 1111 Gaps:137 97.96 1178 40.55 0.0 Probable cation-transporting ATPase C10C6.6 OS Caenorhabditis elegans GN C10C6.6 PE 3 SV 3
blastp_uniprot_sprot sp|O14072|ATC4_SCHPO 24 1140 + 1117 Gaps:161 97.44 1211 39.58 0.0 Cation-transporting ATPase 4 OS Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN cta4 PE 3 SV 1
blastp_uniprot_sprot sp|P39986|ATC6_YEAST 52 1105 + 1054 Gaps:138 91.36 1215 40.18 0.0 Probable cation-transporting ATPase 1 OS Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN SPF1 PE 1 SV 1
blastp_uniprot_sprot sp|O74431|ATC9_SCHPO 183 1074 + 892 Gaps:157 66.84 1315 30.15 2e-75 Probable cation-transporting ATPase C1672.11c OS Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN SPCC1672.11c PE 3 SV 1
blastp_uniprot_sprot sp|Q12697|YPK9_YEAST 183 1123 + 941 Gaps:179 63.59 1472 28.95 9e-67 Vacuolar cation-transporting ATPase YPK9 OS Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN YPK9 PE 1 SV 1
blastp_uniprot_sprot sp|Q5XF89|AT133_MOUSE 182 1134 + 953 Gaps:173 77.44 1219 28.92 3e-62 Probable cation-transporting ATPase 13A3 OS Mus musculus GN Atp13a3 PE 1 SV 1
blastp_uniprot_sprot sp|Q21286|YBF7_CAEEL 184 798 + 615 Gaps:130 55.78 1203 28.76 5e-62 Probable cation-transporting ATPase K07E3.7 OS Caenorhabditis elegans GN K07E3.7/K07E3.6 PE 3 SV 4

50 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
SUPERFAMILY 184 229 46 SSF81665 none none none
SUPERFAMILY 355 429 75 SSF81665 none none none
SUPERFAMILY 920 1136 217 SSF81665 none none none
Phobius 1015 1041 27 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 1 21 21 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
PANTHER 53 638 586 PTHR24093:SF82 none none IPR006544
Phobius 22 40 19 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 1062 1072 11 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Gene3D 471 613 143 G3DSA:3.40.1110.10 none none IPR023299
Pfam 209 368 160 PF00122 none E1-E2 ATPase IPR008250
SUPERFAMILY 441 625 185 SSF81660 none none IPR023299
Phobius 1073 1093 21 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 962 980 19 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 214 930 717 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 74 193 120 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 41 51 11 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Coils 863 884 22 Coil none none none
PANTHER 722 799 78 PTHR24093 none none none
PANTHER 892 1143 252 PTHR24093 none none none
PANTHER 659 696 38 PTHR24093 none none none
PANTHER 53 638 586 PTHR24093 none none none
TIGRFAM 747 795 49 TIGR01494 none ATPase_P-type: HAD ATPase, P-type, family IC IPR001757
PRINTS 284 298 15 PR00119 none P-type cation-transporting ATPase superfamily signature IPR001757
PRINTS 435 449 15 PR00119 none P-type cation-transporting ATPase superfamily signature IPR001757
PRINTS 657 667 11 PR00119 none P-type cation-transporting ATPase superfamily signature IPR001757
PRINTS 776 795 20 PR00119 none P-type cation-transporting ATPase superfamily signature IPR001757
Phobius 1113 1135 23 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Gene3D 725 797 73 G3DSA:3.40.50.1000 none none IPR023214
Gene3D 614 689 76 G3DSA:3.40.50.1000 none none IPR023214
TIGRFAM 373 1116 744 TIGR01657 none P-ATPase-V: P-type ATPase of unknown pump specificity (type V) IPR006544

8 Localization

Analysis Start End Length
TMHMM 993 1015 22
TMHMM 53 75 22
TMHMM 21 43 22
TMHMM 1039 1061 22
TMHMM 186 208 22
TMHMM 1113 1135 22
TMHMM 1074 1093 19
TMHMM 958 980 22

5 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2015_nEpis_3P Qrob_Chr12 12 s_1AOES6_1466 s_1B0DDG_1094 28,97 28,55 30,1 lod 3.6 8.4
Champenoux_2015_nEpis_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,53 25,47 27,72 lod 4.4 8.9
Bourran2_2002_QTL16_peak_Bud_burst_A4 Qrob_Chr11 11 s_A9OIA_166 s_1C6WBF_114 21,23 2,83 42,83 lod 5,1 7,2
Bourran2_2015_nSeqBC_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,06 25,47 27,72 lod 3.6 7.1
Champenoux_2015_nSecLBD_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 25,78 25,47 27,72 lod 6.3 16.6

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 45   Secretory pathway 2 0.792 0.172 NON-PLANT 45