2 GO Terms
| Identifier | Name | Description |
|---|---|---|
| GO:0008152 | metabolic process | The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation. |
| GO:0016597 | amino acid binding | Interacting selectively and non-covalently with an amino acid, organic acids containing one or more amino substituents. |
12 Blast
| Analysis | Hit | Start | End | Strand | Length | Note | Hit Coverage | Hit Length | Hit Pident | E Val | Hit Description |
|---|---|---|---|---|---|---|---|---|---|---|---|
| blastp_kegg | lcl|cit:102614750 | 3 | 220 | + | 218 | none | 73.90 | 295 | 89.91 | 5e-140 | protein-coding |
| blastp_kegg | lcl|pper:PRUPE_ppa009415mg | 3 | 220 | + | 218 | none | 74.40 | 293 | 88.53 | 1e-136 | hypothetical protein |
| blastp_kegg | lcl|tcc:TCM_044260 | 3 | 220 | + | 218 | none | 74.40 | 293 | 88.99 | 1e-136 | ACT domain-containing protein isoform 1 |
| blastp_kegg | lcl|fve:101290696 | 3 | 220 | + | 218 | none | 76.76 | 284 | 87.61 | 2e-136 | unknown protein DS12 from 2D-PAGE of leaf chloroplastic-like |
| blastp_kegg | lcl|pop:POPTR_0010s24480g | 3 | 220 | + | 218 | none | 72.91 | 299 | 88.99 | 4e-136 | POPTRDRAFT_228737 hypothetical protein |
| blastp_kegg | lcl|pmum:103331114 | 3 | 220 | + | 218 | none | 74.40 | 293 | 88.07 | 1e-135 | protein-coding |
| blastp_kegg | lcl|cic:CICLE_v10016113mg | 13 | 220 | + | 208 | none | 100.00 | 208 | 90.38 | 7e-134 | hypothetical protein |
| blastp_kegg | lcl|rcu:RCOM_0888830 | 7 | 220 | + | 214 | Gaps:1 | 99.53 | 214 | 87.79 | 3e-133 | amino acid binding protein putative |
| blastp_kegg | lcl|crb:CARUB_v10001570mg | 3 | 220 | + | 218 | none | 72.67 | 300 | 84.40 | 1e-130 | hypothetical protein |
| blastp_kegg | lcl|cam:101491233 | 3 | 220 | + | 218 | none | 76.76 | 284 | 85.78 | 3e-130 | protein-coding |
| blastp_uniprot_sprot | sp|Q0J709|UP12_ORYSJ | 4 | 220 | + | 217 | none | 76.68 | 283 | 60.83 | 1e-90 | Unknown protein DS12 from 2D-PAGE of leaf chloroplastic OS Oryza sativa subsp. japonica GN Os08g0242700 PE 4 SV 2 |
| blastp_uniprot_sprot | sp|P83643|UP12_ORYSI | 4 | 220 | + | 217 | none | 76.68 | 283 | 60.83 | 1e-90 | Unknown protein DS12 from 2D-PAGE of leaf chloroplastic OS Oryza sativa subsp. indica GN OsI_027381 PE 1 SV 2 |
6 Domain Motifs
| Analysis | Begin | End | Length | Domain Identifier | Cross Ref | Description | Inter Pro |
|---|---|---|---|---|---|---|---|
| PANTHER | 1 | 220 | 220 | PTHR31096 | none | none | none |
| PANTHER | 1 | 220 | 220 | PTHR31096:SF8 | none | none | none |
| Gene3D | 143 | 189 | 47 | G3DSA:3.30.70.260 | none | none | none |
| Pfam | 144 | 178 | 35 | PF01842 | none | ACT domain | IPR002912 |
| ProSiteProfiles | 143 | 220 | 78 | PS51671 | none | ACT domain profile. | IPR002912 |
| SUPERFAMILY | 141 | 195 | 55 | SSF55021 | none | none | none |
18 Qtllist
| Qtl Name | Chromosome Name | Linkage Group | Prox Marker | Dist Marker | Position QTL | Pos One | Pos Two | Test Type | Test Value | R 2 |
|---|---|---|---|---|---|---|---|---|---|---|
| Champenoux_2015_nPriLBD_3P | Qrob_Chr10 | 10 | v_15000_157 | v_15000_310 | 15,68 | 15,9 | 15,91 | lod | 2.4 | 5.5 |
| Bourran2_2014_nSecLBD_3P | Qrob_Chr08 | 8 | s_1BN2OD_551 | s_1B5AYF_599 | 17,17 | 0 | 43,51 | lod | 1,9229 | 4,4 |
| Bourran2_2014_nLBD*_3P | Qrob_Chr08 | 8 | v_5216_549 | v_11837_70 | 12,25 | 0 | 35,55 | lod | 2,5951 | 6 |
| Bourran2_2014_nP*_3P | Qrob_Chr08 | 8 | v_5216_549 | v_11837_70 | 12,19 | 0 | 31,97 | lod | 2,8472 | 6 |
| Bourran2_2002_QTL11_peak_Bud_burst_A4 | Qrob_Chr06 | 6 | s_1C41PA_791 | s_1AM1AV_1141 | 19,17 | 0 | 34,57 | lod | 2,3 | 2,9 |
| Bourran2_2014_aSeqBC_3P | Qrob_Chr06 | 6 | v_506_189 | v_686_77 | 30,72 | 13,58 | 43,48 | lod | 2,2746 | 6,3 |
| Bourran2_2014_aSeqBC*_A4 | Qrob_Chr06 | 6 | s_2F5MK3_712 | v_444_355 | 27,13 | 14,86 | 39,46 | lod | 3,7847 | 9,8 |
| Bourran2_2014_nEpis*_3P | Qrob_Chr08 | 8 | s_1DA4QW_688 | s_1DNI7D_820 | 17,96 | 0 | 37,75 | lod | 2,9745 | 7,5 |
| Bourran2_2014_nEpis*_A4 | Qrob_Chr07 | 7 | v_12400_446 | s_1BPEBU_1211 | 6,93 | 0 | 15,13 | lod | 4,7411 | 11 |
| Bourran2_2014_nFork*_3P | Qrob_Chr06 | 6 | v_12930_125 | s_1AMZEI_909 | 34,28 | 7,43 | 41,48 | lod | 2,4044 | 5,5 |
| Bourran2_2014_nLBD_A4 | Qrob_Chr06 | 6 | v_12930_125 | s_1AMZEI_909 | 37,41 | 9,8 | 50,1 | lod | 1,9524 | 4,1 |
| Bourran2_2014_nPriBD_A4 | Qrob_Chr06 | 6 | v_12930_125 | s_1AMZEI_909 | 34,51 | 3,36 | 51,86 | lod | 1,6747 | 3,9 |
| Bourran2_2014_nPriLBD*_3P | Qrob_Chr11 | 11 | v_12066_307 | s_1B15GJ_447 | 3,37 | 0,57 | 16,17 | lod | 3,4299 | 6,9 |
| Bourran2_2014_nSecLBD_A4 | Qrob_Chr07 | 7 | v_8327_222 | s_1A4WGY_363 | 16,04 | 0 | 44,69 | lod | 2,6373 | 6,5 |
| Bourran2_2014_vEpiBC_A4 | Qrob_Chr06 | 6 | v_12930_125 | s_1AMZEI_909 | 37,55 | 14,41 | 50,01 | lod | 1,7882 | 4,8 |
| Champenoux_2015_nEpis_3P | Qrob_Chr11 | 11 | s_1DG9PM_867 | s_1BZ083_1312 | 26,53 | 25,47 | 27,72 | lod | 4.4 | 8.9 |
| Champenoux_2015_nP_3P | Qrob_Chr06 | 6 | s_1A386O_228 | s_1AYZFS_603 | 27,03 | 26,47 | 27,34 | lod | 2.8 | 7.2 |
| Bourran2_2014_nPriBD*_3P | Qrob_Chr06 | 6 | s_1B6WLL_980 | v_10064_133 | 11,49 | 0 | 31,52 | lod | 4,1208 | 9,1 |
