Protein : Qrob_P0000960.2 Q. robur
Protein Identifier  ? Qrob_P0000960.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=1) K02699 - photosystem I subunit XI Gene Prediction Quality  validated
Protein length 

Sequence

Length: 218  
Kegg Orthology  K02699
Paste the following link
Lists
This Protein isn't in any lists. Upload a list.

Sequence Feature Displayer

Protein Sequence Displayer

J Browse Displayer

0 Synonyms

3 GO Terms

Identifier Name Description
GO:0009522 photosystem I A photosystem that contains an iron-sulfur reaction center associated with accessory pigments and electron carriers. In cyanobacteria and chloroplasts, photosystem I functions as a light-dependent plastocyanin-ferredoxin oxidoreductase, transferring electrons from plastocyanin to ferredoxin; in photosynthetic bacteria that have only a single type I photosystem, such as the green sulfur bacteria, electrons can go either to ferredoxin (Fd) -> NAD+ or to menaquinone (MK) -> Cytb/FeS -> Cytc555 -> photosystem I (cyclic photophosphorylation).
GO:0009538 photosystem I reaction center A photochemical system containing P700, the chlorophyll a dimer that functions as a primary electron donor. Functioning as a light-dependent plastocyanin-ferredoxin oxidoreductase, it transfers electrons from plastocyanin to ferredoxin.
GO:0015979 photosynthesis The synthesis by organisms of organic chemical compounds, especially carbohydrates, from carbon dioxide (CO2) using energy obtained from light rather than from the oxidation of chemical compounds.

31 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pmum:103318789 1 217 + 217 Gaps:1 86.51 252 92.20 3e-121 photosystem I reaction center subunit XI chloroplastic
blastp_kegg lcl|cic:CICLE_v10016637mg 2 217 + 216 none 99.08 218 83.80 2e-120 hypothetical protein
blastp_kegg lcl|cit:102609622 2 217 + 216 none 99.08 218 83.80 2e-120 photosystem I reaction center subunit XI chloroplastic-like
blastp_kegg lcl|tcc:TCM_002614 2 217 + 216 none 99.08 218 85.65 3e-120 Photosystem I reaction center subunit XI
blastp_kegg lcl|pper:PRUPE_ppa011229mg 1 217 + 217 Gaps:1 100.00 218 91.28 7e-120 hypothetical protein
blastp_kegg lcl|vvi:100242802 1 217 + 217 Gaps:4 100.00 221 86.43 9e-119 photosystem I reaction center subunit XI chloroplastic-like
blastp_kegg lcl|gmx:100527240 1 217 + 217 Gaps:5 100.00 214 87.38 2e-118 uncharacterized LOC100527240
blastp_kegg lcl|gmx:100500317 1 217 + 217 Gaps:5 100.00 214 86.45 7e-118 uncharacterized LOC100500317
blastp_kegg lcl|pda:103724125 2 217 + 216 none 98.63 219 84.72 2e-117 photosystem I reaction center subunit XI chloroplastic
blastp_kegg lcl|eus:EUTSA_v10026195mg 2 217 + 216 Gaps:1 99.09 219 82.95 2e-117 hypothetical protein
blastp_pdb 2wsf_L 2 217 + 216 Gaps:4 99.07 216 82.71 2e-106 mol:protein length:216 PHOTOSYSTEM I REACTION CENTER SUBUNIT XI CHL
blastp_pdb 2wse_L 2 217 + 216 Gaps:4 99.07 216 82.71 2e-106 mol:protein length:216 PHOTOSYSTEM I REACTION CENTER SUBUNIT XI CHL
blastp_pdb 2wsc_L 2 217 + 216 Gaps:4 99.07 216 82.71 2e-106 mol:protein length:216 PHOTOSYSTEM I REACTION CENTER SUBUNIT XI CHL
blastp_pdb 3lw5_L 54 214 + 161 none 100.00 161 92.55 9e-95 mol:protein length:161 Putative uncharacterized protein
blastp_pdb 2o01_L 54 217 + 164 none 100.00 164 89.02 6e-87 mol:protein length:164 Photosystem I reaction center subunit XI chl
blastp_pdb 3pcq_L 58 207 + 150 Gaps:13 88.96 154 46.72 7e-40 mol:protein length:154 Photosystem I reaction center subunit XI
blastp_pdb 1jb0_L 58 207 + 150 Gaps:13 88.96 154 46.72 7e-40 mol:protein length:154 PHOTOSYSTEM 1 REACTION CENTRE SUBUNIT XI
blastp_uniprot_sprot sp|Q41385|PSAL_SPIOL 2 217 + 216 Gaps:4 99.07 216 82.71 7e-106 Photosystem I reaction center subunit XI chloroplastic OS Spinacia oleracea GN PSAL PE 1 SV 1
blastp_uniprot_sprot sp|Q39654|PSAL_CUCSA 1 217 + 217 Gaps:2 100.00 217 85.71 7e-103 Photosystem I reaction center subunit XI chloroplastic OS Cucumis sativus GN PSAL PE 2 SV 1
blastp_uniprot_sprot sp|Q9SUI4|PSAL_ARATH 2 217 + 216 Gaps:1 99.09 219 80.18 6e-102 Photosystem I reaction center subunit XI chloroplastic OS Arabidopsis thaliana GN PSAL PE 1 SV 2
blastp_uniprot_sprot sp|P23993|PSAL_HORVU 2 217 + 216 Gaps:10 98.56 209 76.21 2e-97 Photosystem I reaction center subunit XI chloroplastic OS Hordeum vulgare GN PSAL PE 1 SV 1
blastp_uniprot_sprot sp|Q6B8P4|PSAL_GRATL 58 207 + 150 Gaps:14 90.67 150 53.68 8e-43 Photosystem I reaction center subunit XI OS Gracilaria tenuistipitata var. liui GN psaL PE 3 SV 1
blastp_uniprot_sprot sp|O78469|PSAL_GUITH 58 207 + 150 Gaps:14 89.47 152 51.47 4e-42 Photosystem I reaction center subunit XI OS Guillardia theta GN psaL PE 3 SV 1
blastp_uniprot_sprot sp|P51222|PSAL_PORPU 58 207 + 150 Gaps:14 88.89 153 53.68 7e-42 Photosystem I reaction center subunit XI OS Porphyra purpurea GN psaL PE 3 SV 1
blastp_uniprot_sprot sp|Q1XDR5|PSAL_PYRYE 58 207 + 150 Gaps:14 88.89 153 52.21 2e-40 Photosystem I reaction center subunit XI OS Pyropia yezoensis GN psaL PE 3 SV 1
blastp_uniprot_sprot sp|Q8DGB4|PSAL_THEEB 58 207 + 150 Gaps:13 88.39 155 46.72 2e-39 Photosystem I reaction center subunit XI OS Thermosynechococcus elongatus (strain BP-1) GN psaL PE 1 SV 1
blastp_uniprot_sprot sp|P37277|PSAL_SYNY3 58 212 + 155 Gaps:13 90.45 157 47.18 7e-39 Photosystem I reaction center subunit XI OS Synechocystis sp. (strain PCC 6803 / Kazusa) GN psaL PE 3 SV 1
rpsblast_cdd gnl|CDD|177672 50 214 + 165 none 100.00 165 89.09 8e-82 PLN00038 PLN00038 photosystem I reaction center subunit XI (PsaL) Provisional.
rpsblast_cdd gnl|CDD|145644 58 214 + 157 Gaps:4 99.35 154 56.21 5e-56 pfam02605 PsaL Photosystem I reaction centre subunit XI. This family consists of the photosystem I reaction centre subunit XI PsaL from plants and bacteria. PsaL is one of the smaller subunits in photosystem I with only two transmembrane alpha helices and interacts closely with PsaI.
rpsblast_cdd gnl|CDD|177043 57 207 + 151 Gaps:13 96.50 143 54.35 4e-44 CHL00120 psaL photosystem I subunit XI Validated.

9 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Pfam 58 212 155 PF02605 none Photosystem I reaction centre subunit XI IPR003757
SUPERFAMILY 60 216 157 SSF81568 none none IPR003757
Phobius 217 217 1 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 192 216 25 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 1 127 127 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 154 191 38 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
ProDom 60 207 148 PD005947 none PHOTOSYSTEM SUBUNIT I XI REACTION CENTER MEMBRANE PSI PHOTOSYNTHESIS V IPR003757
Gene3D 58 215 158 G3DSA:1.20.1240.10 none none IPR003757
Phobius 128 153 26 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none

2 Localization

Analysis Start End Length
TMHMM 188 210 22
TMHMM 132 154 22

8 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2004_QTL1_peak_Bud_burst_A4 Qrob_Chr01 1 s_1AMVCC_444 s_1BE1VC_321 4 0 31 lod 3,2 7,4
Bourran2_2003_QTL8_peak_Bud_burst_A4 Qrob_Chr01 1 s_1AH7I_610 s_1BE1VC_321 4,6 0 28 lod 3,5 7,4
Bourran2_2007_QTL6_peak_Bud_burst_3P Qrob_Chr01 1 s_1BE1VC_321 s_1A5JRZ_890 5 0 25 lod 2,4 6
Bourran2_2014_nEpiBC_3P Qrob_Chr01 1 v_1588_550 s_1AZJRA_1600 30,48 9,48 43,98 lod 2,3642 6,3
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran2_2014_nSecLBD_3P Qrob_Chr08 8 s_1BN2OD_551 s_1B5AYF_599 17,17 0 43,51 lod 1,9229 4,4
Bourran2_2014_rEpiBC*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 35,77 14,11 55,31 lod 2,9413 6,2
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 41   Mitochondrion 3 0.016 0.840 NON-PLANT 41