GRS - Genome Report System

Leptosphaeria maculans GRS

Functional annotation

Lema_P087790.1

Gene Identifier

DbXrefs

Domain/Motif (Interproscan results)

Localization / Targeting

Predicted function

Blast based analysis

Analysis	Hit	start	end	length	Note	Hit coverage	Hit length	Hit pident	Hit pcons	eValue	Hit description
blastp_kegg	nfi:NFIA_010210	4	431	428	n/a	84.80	421	57.14	16.53	1e-125	hypothetical protein
	ani:AN0865.2	4	430	427	n/a	86.36	418	56.23	16.34	1e-122	hypothetical protein
	afm:AFUA_1G15210	39	431	393	n/a	88.38	370	57.19	15.90	1e-110	hypothetical protein
	mgr:MGG_09217	2	431	430	n/a	80.38	418	54.76	18.15	1e-108	hypothetical protein
	ssl:SS1G_12537	2	430	429	n/a	83.45	423	54.11	17.56	1e-107	hypothetical protein
	bfu:BC1G_03739	6	430	425	n/a	74.67	454	55.46	17.40	1e-105	hypothetical protein
	aor:AO090005001199	58	431	374	n/a	85.01	347	56.95	17.29	1e-93	putative trehalase
	fgr:FG01856.1	6	430	425	n/a	77.43	421	50.92	17.79	2e-90	hypothetical protein
	ang:An01g13460	4	391	388	n/a	91.67	372	54.84	16.72	3e-88	hypothetical protein
	pan:PODANSg9064	136	430	295	n/a	73.19	332	48.15	15.64	3e-60	hypothetical protein
blastp_uniprot_sprot	sp\|Q9Y7J3\|YOI7_SCHPO	183	431	249	n/a	58.98	373	44.09	19.09	2e-49	UPF0586 protein C1778.07 OS Schizosaccharomyces pombe GN SPBC1778.07 PE 2 SV 1
	sp\|Q54ST2\|U586_DICDI	137	352	216	n/a	36.93	463	46.78	18.71	7e-42	UPF0586 protein OS Dictyostelium discoideum GN DDB_G0282239 PE 3 SV 1
	sp\|Q8N4J0\|CI041_HUMAN	133	407	275	n/a	48.41	409	41.92	21.72	4e-40	UPF0586 protein C9orf41 OS Homo sapiens GN C9orf41 PE 1 SV 1
	sp\|Q80UY1\|CI041_MOUSE	133	407	275	n/a	49.50	400	41.92	21.72	1e-39	UPF0586 protein C9orf41 homolog OS Mus musculus PE 2 SV 1
	sp\|Q5BJZ6\|CI041_RAT	133	407	275	n/a	49.50	400	41.41	22.22	2e-39	UPF0586 protein C9orf41 homolog OS Rattus norvegicus PE 2 SV 1
	sp\|Q9I7X6\|U586_DROME	136	430	295	n/a	41.91	439	45.11	20.65	4e-39	UPF0586 protein CG11596 OS Drosophila melanogaster GN CG11596 PE 1 SV 1
	sp\|P53934\|YNJ2_YEAST	130	429	300	n/a	36.75	400	44.90	17.01	3e-25	UPF0586 protein YNL092W OS Saccharomyces cerevisiae GN YNL092W PE 1 SV 1
blastp_pdb	no results
rpsblast_cdd	gnl\|CDD\|116552	127	431	305	Gaps:39	99.25	268	43.98	16.54	3e-78	pfam07942 N2227 N2227-like protein. This family features sequences that are similar to a region of hypothetical yeast gene product N2227. This is thought to be expressed during meiosis and may be involved in the defence response to stressful conditions.
	gnl\|CDD\|116827	303	336	34	n/a	34.69	98	35.29	11.76	0.018	pfam08242 Methyltransf_12 Methyltransferase domain. Members of this family are SAM dependent methyltransferases.
	gnl\|CDD\|116826	303	336	34	n/a	35.79	95	29.41	17.65	0.35	pfam08241 Methyltransf_11 Methyltransferase domain. Members of this family are SAM dependent methyltransferases.
	gnl\|CDD\|30770	211	352	142	Gaps:21	52.84	282	20.81	15.44	1.4	COG0421 SpeE Spermidine synthase [Amino acid transport and metabolism].
	gnl\|CDD\|110561	213	338	126	Gaps:12	54.77	241	21.97	18.18	2.1	pfam01564 Spermine_synth Spermine/spermidine synthase. Spermine and spermidine are polyamines. This family includes spermidine synthase that catalyses the fifth (last) step in the biosynthesis of spermidine from arginine and spermine synthase.
rpsblast_kog	gnl\|CDD\|38009	5	431	427	Gaps:64	98.37	369	38.02	18.18	4e-71	KOG2798 KOG2798 KOG2798 Putative trehalase [Carbohydrate transport and metabolism].
	gnl\|CDD\|39501	303	353	51	Gaps:5	18.25	252	28.26	19.57	0.35	KOG4300 KOG4300 KOG4300 Predicted methyltransferase [General function prediction only].
	gnl\|CDD\|36483	255	405	151	Gaps:17	39.01	364	21.83	19.72	0.54	KOG1269 KOG1269 KOG1269 SAM-dependent methyltransferases [Lipid transport and metabolism General function prediction only].
	gnl\|CDD\|36753	304	336	33	n/a	11.15	296	36.36	12.12	6.0	KOG1540 KOG1540 KOG1540 Ubiquinone biosynthesis methyltransferase COQ5 [Coenzyme transport and metabolism].
	gnl\|CDD\|38528	96	119	24	n/a	13.48	178	33.33	4.17	7.3	KOG3318 KOG3318 KOG3318 Predicted membrane protein [Function unknown].

Other analysis

Functional Gbrowse

Structural Gbrowse

Genome Mapping at gene locus

Analysis	Hit name	RefStart	RefEnd	Hit length	Hit identity	Hit coverage	eValue	Hit description
blastx_uniprot_trembl	Q0V0Z3	809341	810465	379	71.31	98.42	n/a	Putative uncharacterized protein - Phaeosphaeria nodorum (Septoria nodorum)
	Q5BF15	809128	810462	418	52.11	96.41	n/a	Putative uncharacterized protein - Emericella nidulans (Aspergillus nidulans)
	A1CNT4	809128	810465	420	52.85	95.95	n/a	Putative uncharacterized protein - Aspergillus clavatus
	A1D1P7	809128	810465	421	52.88	94.77	n/a	Putative uncharacterized protein - Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / NRRL 181) (Aspergillus fischerianus (strain ATCC 1020 / DSM 3700 / NRRL 181))
	A6R8X5	809125	810462	421	50.61	96.67	n/a	Putative uncharacterized protein - Ajellomyces capsulata (strain NAm1) (Histoplasma capsulatum)
	Q4WRT0	809287	810465	370	53.30	98.38	n/a	Putative uncharacterized protein - Aspergillus fumigatus (Sartorya fumigata)
	A7F4L2	809116	810462	423	49.26	95.51	n/a	Putative uncharacterized protein - Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) (White mold) (Whetzelinia sclerotiorum)
	Q0CZQ2	809287	810462	386	50.26	98.96	n/a	Putative uncharacterized protein - Aspergillus terreus (strain NIH 2624)
	A2QB07	809116	810345	372	53.55	98.39	n/a	Similarity to hypothetical protein B9B15.50 - Neurospora crassa - Aspergillus niger
	A7F4L2	809116	810462	423	49.26	95.51	n/a	Putative uncharacterized protein - Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) (White mold) (Whetzelinia sclerotiorum)
	A2QB07	809116	810345	372	53.55	98.39	n/a	Similarity to hypothetical protein B9B15.50 - Neurospora crassa - Aspergillus niger
	Q1E2J8	809131	810543	524	48.24	81.11	n/a	Putative uncharacterized protein - Coccidioides immitis
blastx_FNG31_prot	SNU02321.1	809119	810465	435	74.13	98.62	n/a	Stagonospora nodorum hypothetical protein translation
	AN0865	809128	810462	418	52.11	96.41	n/a	Aspergillus nidulans AN0865.3 conserved hypothetical protein translation 419 aa
	gi:70996270:ref:XP_752890.1:	809287	810465	370	53.30	98.38	n/a	Aspergillus fumigatus Af293 hypothetical protein Afu1g15210
	SS1G_12537.1	809116	810462	423	49.26	95.51	n/a	sclerotinia_sclerotiorum hypothetical protein translation 424 aa
	CHG07315.1	809251	810462	411	48.15	91.97	n/a	Chaetomium globosum hypothetical protein translation 412 aa
	BC1G_03739.1	809134	810462	454	49.37	87.89	n/a	Botrytis cinerea hypothetical protein translation 455 aa
	FG01856.1	809245	810462	421	48.28	89.55	n/a	fusarium_graminearum hypothetical protein 422 aa
	jgi:Triree:37581	809245	810462	429	48.68	88.58	n/a	Trichoderma reesei
	AO090005001199	809344	810465	347	52.46	99.42	n/a	Aspergillus oryzae putative trehalase
	SNU02321.1	809119	810465	435	74.13	98.62	n/a	Stagonospora nodorum hypothetical protein translation
	SS1G_12537.1	809116	810462	423	49.26	95.51	n/a	sclerotinia_sclerotiorum hypothetical protein translation 424 aa
	CIMG_03215.2	809131	810543	524	48.24	81.11	n/a	Coccidioides immitis hypothetical protein translation 525 aa
blat_BES	QS0AAE107ZC06RM1	810182	810856	736	n/a	n/a	n/a	n/a
blastx_SN15proteins	gnl:WGS:AAGI:SNOT_02321.2:gb:EAT90533	809341	810465	379	71.31	98.42	n/a	n/a
	gnl:WGS:AAGI:SNOT_12539.2:gb:EAT79837	809617	810462	437	35.02	49.66	n/a	n/a
	gnl:WGS:AAGI:SNOT_12322.2:gb:EAT80135	809602	810366	995	39.00	20.10	n/a	n/a
RepeatMasker_SR	no results
RepeatMasker_LC	no results
sim4_Lm_allest	no results
sim4_lm_allest6_clctg	no results
sim4_cDNA_BHowlett	no results
blastx_uniprot_sprot	Q80UY1	809233	810462	400	36.15	85.75	n/a	Uncharacterized protein C9orf41 homolog - Mus musculus (Mouse)
	Q8N4J0	809569	810462	409	38.52	62.84	n/a	Uncharacterized protein C9orf41 - Homo sapiens (Human)
	Q5BJZ6	809233	810462	400	35.57	85.75	n/a	Uncharacterized protein C9orf41 homolog - Rattus norvegicus (Rat)
	P53934	809521	810459	400	30.70	79.00	n/a	Uncharacterized protein YNL092W - Saccharomyces cerevisiae (Baker's yeast)
REPET	no results
MUMer_show_coords_lm_WA74	no results