GRS - Genome Report System

Leptosphaeria maculans GRS

Functional annotation

Lema_P081940.1

Gene Identifier

DbXrefs

Domain/Motif (Interproscan results)

Localization / Targeting

Predicted function

Blast based analysis

Analysis	Hit	start	end	length	Note	Hit coverage	Hit length	Hit pident	Hit pcons	eValue	Hit description
blastp_kegg	ani:AN6048.2	11	417	407	n/a	89.44	445	54.02	17.34	1e-139	hypothetical protein K00813 aspartate aminotransferase [EC:2.6.1.1]
	nfi:NFIA_085130	9	417	409	n/a	88.10	462	52.33	17.69	1e-138	aspartate transaminase putative K00813 aspartate aminotransferase [EC:2.6.1.1]
	afm:AFUA_2G09650	9	417	409	n/a	86.78	469	52.09	17.69	1e-136	aspartate transaminase (EC:2.6.1.1) K00813 aspartate aminotransferase [EC:2.6.1.1]
	pan:PODANSg463	9	417	409	n/a	86.89	450	54.99	16.37	1e-135	hypothetical protein K00813 aspartate aminotransferase [EC:2.6.1.1]
	aor:AO090011000679	9	417	409	n/a	89.84	443	52.51	18.59	1e-135	aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT2/GOT1 K00813 aspartate aminotransferase [EC:2.6.1.1]
	fgr:FG09739.1	9	417	409	n/a	94.93	414	51.65	18.07	1e-131	hypothetical protein K00813 aspartate aminotransferase [EC:2.6.1.1]
	ncr:NCU07941	7	417	411	n/a	82.78	482	52.88	14.29	1e-130	aspartate aminotransferase K00813 aspartate aminotransferase [EC:2.6.1.1]
	mgr:MGG_04156	16	417	402	n/a	82.71	457	56.35	14.81	1e-128	hypothetical protein K00813 aspartate aminotransferase [EC:2.6.1.1]
	ang:An16g05570	9	389	381	n/a	88.78	419	54.03	16.67	1e-128	hypothetical protein K00813 aspartate aminotransferase [EC:2.6.1.1]
	ssl:SS1G_14097	15	417	403	n/a	92.89	422	51.02	18.37	1e-128	hypothetical protein K00813 aspartate aminotransferase [EC:2.6.1.1]
blastp_uniprot_sprot	sp\|O42652\|AATC_SCHPO	61	417	357	n/a	84.35	409	47.25	17.97	1e-101	Aspartate aminotransferase cytoplasmic OS Schizosaccharomyces pombe GN aat2 PE 2 SV 1
	sp\|Q55F21\|AATM_DICDI	14	417	404	n/a	92.49	426	44.16	17.26	6e-98	Aspartate aminotransferase mitochondrial OS Dictyostelium discoideum GN aatA PE 3 SV 1
	sp\|Q5R691\|AATC_PONAB	14	416	403	n/a	86.92	413	47.91	17.55	2e-96	Aspartate aminotransferase cytoplasmic OS Pongo abelii GN GOT1 PE 2 SV 1
	sp\|A5A6K8\|AATC_PANTR	14	416	403	n/a	86.92	413	47.63	17.83	3e-96	Aspartate aminotransferase cytoplasmic OS Pan troglodytes GN GOT1 PE 2 SV 1
	sp\|P23542\|AATC_YEAST	61	418	358	n/a	83.73	418	45.14	17.43	4e-96	Aspartate aminotransferase cytoplasmic OS Saccharomyces cerevisiae GN AAT2 PE 1 SV 3
	sp\|P17174\|AATC_HUMAN	14	416	403	n/a	86.92	413	47.63	17.83	4e-96	Aspartate aminotransferase cytoplasmic OS Homo sapiens GN GOT1 PE 1 SV 3
	sp\|Q4R5L1\|AATC_MACFA	16	416	401	n/a	86.44	413	47.62	17.93	1e-95	Aspartate aminotransferase cytoplasmic OS Macaca fascicularis GN GOT1 PE 2 SV 1
	sp\|Q4R559\|AATM_MACFA	22	417	396	n/a	85.58	430	44.84	19.57	9e-95	Aspartate aminotransferase mitochondrial OS Macaca fascicularis GN GOT2 PE 2 SV 1
	sp\|P28011\|AAT1_MEDSA	14	416	403	n/a	90.91	418	43.95	17.89	2e-94	Aspartate aminotransferase 1 OS Medicago sativa GN AAT-1 PE 2 SV 2
	sp\|P00505\|AATM_HUMAN	22	417	396	n/a	85.58	430	44.84	19.29	3e-94	Aspartate aminotransferase mitochondrial OS Homo sapiens GN GOT2 PE 1 SV 2
blastp_pdb	1yaa_D	61	418	358	n/a	84.95	412	45.14	17.71	4e-97	mol:protein length:412 ASPARTATE AMINOTRANSFERASE
	1yaa_C	61	418	358	n/a	84.95	412	45.14	17.71	4e-97	mol:protein length:412 ASPARTATE AMINOTRANSFERASE
	1yaa_B	61	418	358	n/a	84.95	412	45.14	17.71	4e-97	mol:protein length:412 ASPARTATE AMINOTRANSFERASE
	1yaa_A	61	418	358	n/a	84.95	412	45.14	17.71	4e-97	mol:protein length:412 ASPARTATE AMINOTRANSFERASE
	3ii0_D	30	416	387	n/a	81.28	422	48.98	17.49	1e-95	mol:protein length:422 Aspartate aminotransferase cytoplasmic
	3ii0_C	30	416	387	n/a	81.28	422	48.98	17.49	1e-95	mol:protein length:422 Aspartate aminotransferase cytoplasmic
	3ii0_B	30	416	387	n/a	81.28	422	48.98	17.49	1e-95	mol:protein length:422 Aspartate aminotransferase cytoplasmic
	3ii0_A	30	416	387	n/a	81.28	422	48.98	17.49	1e-95	mol:protein length:422 Aspartate aminotransferase cytoplasmic
	9aat_B	22	417	396	n/a	90.27	401	44.48	20.99	2e-94	mol:protein length:401 ASPARTATE AMINOTRANSFERASE
	9aat_A	22	417	396	n/a	90.27	401	44.48	20.99	2e-94	mol:protein length:401 ASPARTATE AMINOTRANSFERASE
rpsblast_cdd	gnl\|CDD\|31637	14	416	403	Gaps:9	99.49	396	46.19	17.01	1e-124	COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism].
	gnl\|CDD\|137160	13	417	405	Gaps:13	99.75	397	43.18	15.15	1e-118	PRK09257 PRK09257 aromatic amino acid aminotransferase Provisional.
	gnl\|CDD\|109221	37	412	376	Gaps:49	100.00	351	31.05	12.54	1e-55	pfam00155 Aminotran_1_2 Aminotransferase class I and II.
	gnl\|CDD\|99734	40	398	359	Gaps:52	95.71	350	22.69	15.22	7e-33	cd00609 AAT_like Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate which depending on the reaction is the substrate in four kinds of reactions (1) transamination (movement of amino groups) (2) racemization (redistribution of enantiomers) (3) decarboxylation (removing COOH groups) and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha beta and gamma classes based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. The major groups in this CD corresponds to Aspartate aminotransferase a b and c Tyrosine Alanine Aromatic-amino-acid Glutamine phenylpyruvate 1-Aminocyclopropane-1-carboxylate synthase Histidinol-phosphate gene products of malY and cobC Valine-pyruvate aminotransferase and Rhizopine catabolism regulatory protein..
	gnl\|CDD\|30785	58	355	298	Gaps:25	69.97	393	22.18	13.09	6e-11	COG0436 COG0436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism].
rpsblast_kog	gnl\|CDD\|36626	9	417	409	Gaps:8	98.29	410	49.63	12.41	1e-126	KOG1412 KOG1412 KOG1412 Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT2/GOT1 [Amino acid transport and metabolism].
	gnl\|CDD\|36625	13	417	405	Gaps:8	92.97	427	45.84	18.39	1e-111	KOG1411 KOG1411 KOG1411 Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT1/GOT2 [Amino acid transport and metabolism].
	gnl\|CDD\|35478	197	272	76	Gaps:6	17.62	420	29.73	13.51	9e-04	KOG0257 KOG0257 KOG0257 Kynurenine aminotransferase glutamine transaminase K [Amino acid transport and metabolism].
	gnl\|CDD\|35479	117	354	238	Gaps:35	50.32	475	22.59	16.32	0.001	KOG0258 KOG0258 KOG0258 Alanine aminotransferase [Amino acid transport and metabolism].
	gnl\|CDD\|35477	116	355	240	Gaps:41	48.20	471	22.91	13.22	0.054	KOG0256 KOG0256 KOG0256 1-aminocyclopropane-1-carboxylate synthase and related proteins [Signal transduction mechanisms].

Other analysis

Functional Gbrowse

Structural Gbrowse

Genome Mapping at gene locus

Analysis	Hit name	RefStart	RefEnd	Hit length	Hit identity	Hit coverage	eValue	Hit description
blastx_uniprot_trembl	Q5B082	1426810	1428144	445	54.45	88.31	n/a	Putative uncharacterized protein - Emericella nidulans (Aspergillus nidulans)
	A1DGQ3	1426780	1428144	462	53.63	86.36	n/a	Aspartate transaminase putative - Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / NRRL 181) (Aspergillus fischerianus (strain ATCC 1020 / DSM 3700 / NRRL 181))
	A1C625	1426780	1428144	416	52.88	95.91	n/a	Aspartate transaminase putative - Aspergillus clavatus
	Q4X1K5	1426780	1428144	469	53.38	85.07	n/a	Aspartate transaminase putative - Aspergillus fumigatus (Sartorya fumigata)
	Q2TZX5	1426780	1428144	443	52.62	90.52	n/a	Aspartate aminotransferase - Aspergillus oryzae
	A6RGB2	1426804	1428144	419	53.16	94.27	n/a	Aspartate aminotransferase - Ajellomyces capsulata (strain NAm1) (Histoplasma capsulatum)
	A4R592	1426825	1428144	457	55.21	84.03	n/a	Aspartate aminotransferase - Magnaporthe grisea (Rice blast fungus) (Pyricularia grisea)
	A2R823	1426780	1428060	419	54.69	89.02	n/a	Contig An16c0190 complete genome. precursor - Aspergillus niger
	Q1DPA1	1426780	1428144	421	50.12	95.72	n/a	Aspartate aminotransferase - Coccidioides immitis
	Q7S9X7	1426798	1428144	482	52.37	83.20	n/a	Aspartate aminotransferase - Neurospora crassa
	A1DGQ3	1426780	1428144	462	53.63	86.36	n/a	Aspartate transaminase putative - Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / NRRL 181) (Aspergillus fischerianus (strain ATCC 1020 / DSM 3700 / NRRL 181))
	A1C625	1426780	1428144	416	52.88	95.91	n/a	Aspartate transaminase putative - Aspergillus clavatus
	Q4X1K5	1426780	1428144	469	53.38	85.07	n/a	Aspartate transaminase putative - Aspergillus fumigatus (Sartorya fumigata)
	Q2TZX5	1426780	1428144	443	52.62	90.52	n/a	Aspartate aminotransferase - Aspergillus oryzae
	A2R823	1426780	1428060	419	54.69	89.02	n/a	Contig An16c0190 complete genome. precursor - Aspergillus niger
	Q1DPA1	1426780	1428144	421	50.12	95.72	n/a	Aspartate aminotransferase - Coccidioides immitis
blastx_FNG31_prot	jgi:Triree:42007	1426825	1428141	414	54.81	93.00	n/a	Trichoderma reesei
	AN6048	1426810	1428144	445	54.45	88.31	n/a	Aspergillus nidulans AN6048.3 conserved hypothetical protein translation 446 aa
	gi:71001234:ref:XP_755298.1:	1426780	1428144	469	53.38	85.07	n/a	Aspergillus fumigatus Af293 aspartate transaminase
	AO090011000679	1426780	1428144	443	52.62	90.52	n/a	Aspergillus oryzae aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT2/GOT1
	FG09739.1	1426804	1428144	414	51.65	94.93	n/a	fusarium_graminearum hypothetical protein 415 aa
	MGG_04156.5	1426825	1428144	457	55.21	84.03	n/a	magnaporthe_grisea hypothetical protein translation 458 aa
	NCU07941.2	1426798	1428144	482	52.37	83.20	n/a	Neurospora crassa hypothetical protein translation 483 aa
	CIMG_07862.2	1426780	1428144	421	50.12	95.72	n/a	Coccidioides immitis conserved hypothetical protein translation 422 aa
	SS1G_14097.1	1426822	1428144	422	51.69	91.23	n/a	sclerotinia_sclerotiorum hypothetical protein translation 423 aa
	BC1G_13706.1	1426789	1428144	439	45.22	97.72	n/a	Botrytis cinerea hypothetical protein translation 440 aa
	gi:71001234:ref:XP_755298.1:	1426780	1428144	469	53.38	85.07	n/a	Aspergillus fumigatus Af293 aspartate transaminase
	AO090011000679	1426780	1428144	443	52.62	90.52	n/a	Aspergillus oryzae aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT2/GOT1
	CIMG_07862.2	1426780	1428144	421	50.12	95.72	n/a	Coccidioides immitis conserved hypothetical protein translation 422 aa
blat_BES	no results
blastx_SN15proteins	gnl:WGS:AAGI:SNOT_08796.2:gb:EAT83964	1427206	1428144	695	43.38	46.76	n/a	n/a
blastx_SN15proteins	gnl:WGS:AAGI:SNOT_07515.2:gb:EAT84981	1427422	1428138	237	47.23	99.16	n/a	n/a
RepeatMasker_SR	no results
RepeatMasker_LC	no results
sim4_Lm_allest	no results
sim4_lm_allest6_clctg	no results
sim4_cDNA_BHowlett	no results
blastx_uniprot_sprot	O42652	1426804	1428144	409	47.37	97.56	n/a	Aspartate aminotransferase cytoplasmic - Schizosaccharomyces pombe (Fission yeast)
	P33097	1426819	1428141	413	46.02	97.34	n/a	Aspartate aminotransferase cytoplasmic - Bos taurus (Bovine)
	P00503	1427024	1428141	413	47.73	85.23	n/a	Aspartate aminotransferase cytoplasmic - Sus scrofa (Pig)
	P23542	1427215	1428147	418	46.79	74.64	n/a	Aspartate aminotransferase cytoplasmic - Saccharomyces cerevisiae (Baker's yeast)
	P08906	1427060	1428141	413	46.92	82.57	n/a	Aspartate aminotransferase cytoplasmic - Equus caballus (Horse)
	Q22067	1427060	1428144	408	46.41	81.86	n/a	Probable aspartate aminotransferase cytoplasmic - Caenorhabditis elegans
	Q5R691	1427197	1428141	413	46.35	76.27	n/a	Aspartate aminotransferase cytoplasmic - Pongo pygmaeus (Orangutan)
	A5A6K8	1427197	1428141	413	46.03	76.27	n/a	Aspartate aminotransferase cytoplasmic - Pan troglodytes (Chimpanzee)
	P17174	1427197	1428141	413	46.03	76.27	n/a	Aspartate aminotransferase cytoplasmic - Homo sapiens (Human)
	Q4R5L1	1427197	1428141	413	46.03	76.27	n/a	Aspartate aminotransferase cytoplasmic - Macaca fascicularis (Crab eating macaque) (Cynomolgus monkey)
REPET	no results
MUMer_show_coords_lm_WA74	no results