GRS - Genome Report System

Leptosphaeria maculans GRS

Functional annotation

Lema_P054740.1

Gene Identifier

DbXrefs

Domain/Motif (Interproscan results)

Localization / Targeting

Predicted function

Blast based analysis

Analysis	Hit	start	end	length	Note	Hit coverage	Hit length	Hit pident	Hit pcons	eValue	Hit description
blastp_kegg	ssl:SS1G_03606	18	304	287	n/a	95.03	302	57.49	13.24	1e-101	glucan 1 3-beta-glucosidase
	bfu:BC1G_08370	18	304	287	n/a	94.72	303	56.79	12.89	2e-99	hypothetical protein
	ani:AN1155.2	9	304	296	n/a	56.08	485	54.41	14.34	5e-87	hypothetical protein
	aor:AO090038000279	1	304	304	n/a	99.34	304	50.00	14.57	3e-86	hypothetical protein K01210 glucan 1 3-beta-glucosidase [EC:3.2.1.58]
	nfi:NFIA_014130	1	304	304	n/a	97.38	305	49.16	15.82	5e-83	1 3-beta-glucanosyltransferase Bgt1
	ang:An08g03580	19	304	286	n/a	93.36	301	50.18	15.66	9e-81	hypothetical protein K01210 glucan 1 3-beta-glucosidase [EC:3.2.1.58]
	afm:AFUA_1G11460	57	304	248	n/a	80.66	305	50.41	15.85	4e-72	1 3-beta-glucanosyltransferase Bgt1 (EC:3.2.1.-) K01210 glucan 1 3-beta-glucosidase [EC:3.2.1.58]
	kla:KLLA0F03036g	1	304	304	n/a	89.71	311	44.80	16.85	3e-56	hypothetical protein K01210 glucan 1 3-beta-glucosidase [EC:3.2.1.58]
	dha:DEHA0G19943g	19	304	286	n/a	85.62	306	44.27	20.99	1e-54	hypothetical protein K01210 glucan 1 3-beta-glucosidase [EC:3.2.1.58]
	ago:AGOS_AGL343C	20	304	285	n/a	81.76	307	44.62	19.52	4e-51	AGL343Cp
blastp_uniprot_sprot	sp\|P43070\|BGL2_CANAL	19	304	286	n/a	86.69	308	41.57	18.35	3e-49	Glucan 1 3-beta-glucosidase OS Candida albicans GN BGL2 PE 1 SV 1
	sp\|P15703\|BGL2_YEAST	5	278	274	n/a	80.51	313	41.67	18.65	7e-47	Glucan 1 3-beta-glucosidase OS Saccharomyces cerevisiae GN BGL2 PE 1 SV 1
	sp\|O13990\|BGL2_SCHPO	7	304	298	n/a	76.64	321	37.80	21.14	2e-35	Glucan 1 3-beta-glucosidase OS Schizosaccharomyces pombe GN bgl2 PE 2 SV 4
blastp_pdb	no results
rpsblast_cdd	gnl\|CDD\|34897	18	296	279	Gaps:21	87.21	305	32.71	15.41	1e-39	COG5309 COG5309 Exo-beta-1 3-glucanase [Carbohydrate transport and metabolism].
	gnl\|CDD\|109392	25	304	280	Gaps:57	99.68	310	19.74	12.62	5e-18	pfam00332 Glyco_hydro_17 Glycosyl hydrolases family 17.
	gnl\|CDD\|99823	190	247	58	n/a	29.74	195	24.14	17.24	0.015	cd05780 DNA_polB_Kod1_like_exo The 3'-5' exonuclease domain of archaeal family-B DNA polymerases with similarity to Pyrococcus kodakaraensis Kod1 including polymerases from Desulfurococcus (D. Tok Pol) and Thermococcus gorgonarius (Tgo Pol). Kod1 D. Tok Pol and Tgo Pol are thermostable enzymes that exhibit both polymerase and 3'-5' exonuclease activities. They are family-B DNA polymerases. Their amino termini harbor a DEDDy-type DnaQ-like 3'-5' exonuclease domain that contains three sequence motifs termed ExoI ExoII and ExoIII with a specific YX(3)D pattern at ExoIII. These motifs are clustered around the active site and are involved in metal binding and catalysis. The exonuclease domain of family B polymerases contains a beta hairpin structure that plays an important role in active site switching in the event of nucleotide misincorporation. Members of this subfamily show similarity to eukaryotic DNA polymerases involved in DNA replication. Some archaea possess multiple family-B DNA polymerases. Phylogenetic analyses of eubacterial archaeal and eukaryotic family-B DNA polymerases support independent gene duplications during the evolution of archaeal and eukaryotic family-B DNA polymerases..
	gnl\|CDD\|117782	159	207	49	Gaps:9	4.15	963	45.00	22.50	0.14	pfam09231 RDV-p3 Rice dwarf virus p3. Members of this family are core structural proteins found in the double-stranded RNA virus Phytoreovirus. They are large proteins without apparent domain division with a number of all-alpha regions and one all beta domain near the C-terminal end.
	gnl\|CDD\|140018	68	213	146	Gaps:12	20.52	653	24.63	16.42	0.27	PRK13962 PRK13962 bifunctional phosphoglycerate kinase/triosephosphate isomerase Provisional.
rpsblast_kog	gnl\|CDD\|35688	61	197	137	Gaps:44	19.95	887	20.34	10.17	0.40	KOG0467 KOG0467 KOG0467 Translation elongation factor 2/ribosome biogenesis protein RIA1 and related proteins [Translation ribosomal structure and biogenesis].
	gnl\|CDD\|35620	241	280	40	Gaps:1	1.91	2142	34.15	17.07	0.72	KOG0399 KOG0399 KOG0399 Glutamate synthase [Amino acid transport and metabolism].
	gnl\|CDD\|35465	120	152	33	Gaps:9	4.60	913	35.71	9.52	2.9	KOG0244 KOG0244 KOG0244 Kinesin-like protein [Cytoskeleton].

Other analysis

Functional Gbrowse

Structural Gbrowse

Genome Mapping at gene locus

Analysis	Hit name	RefStart	RefEnd	Hit length	Hit identity	Hit coverage	eValue	Hit description
blastx_uniprot_trembl	A6S853	1395951	1396846	303	57.19	91.75	n/a	Putative uncharacterized protein - Botryotinia fuckeliana (strain B05.10) (Noble rot fungus) (Botrytis cinerea)
	A7EE66	1395951	1396846	302	56.83	92.05	n/a	Glucan 1 3-beta-glucosidase - Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) (White mold) (Whetzelinia sclerotiorum)
	Q96UK6	1395951	1396846	306	56.83	88.56	n/a	Beta-glucosidase 4 - Coccidioides immitis
	Q1DRT4	1395951	1396846	306	56.83	88.56	n/a	Putative uncharacterized protein - Coccidioides immitis
	A6QWS1	1395945	1396846	302	55.31	90.40	n/a	Beta-glucosidase 4 - Ajellomyces capsulata (strain NAm1) (Histoplasma capsulatum)
	A1CPY5	1395951	1396846	303	52.75	90.10	n/a	1 3-beta-glucanosyltransferase Bgt1 - Aspergillus clavatus
	Q5BE75	1395945	1396846	485	53.87	55.88	n/a	Putative uncharacterized protein - Emericella nidulans (Aspergillus nidulans)
	Q0D148	1395951	1396846	307	53.33	87.95	n/a	Putative uncharacterized protein - Aspergillus terreus (strain NIH 2624)
	Q2U2X7	1395954	1396846	304	53.11	89.80	n/a	Predicted protein - Aspergillus oryzae
	Q4WSV9	1395951	1396846	305	51.82	89.84	n/a	1 3-beta-glucanosyltransferase Bgt1 - Aspergillus fumigatus (Sartorya fumigata)
blastx_FNG31_prot	SS1G_03606.1	1395951	1396846	302	56.83	92.05	n/a	sclerotinia_sclerotiorum Glucan 13-beta-glucosidase precursor translation 303 aa
	BC1G_08370.1	1395951	1396846	303	57.19	91.75	n/a	Botrytis cinerea hypothetical protein translation 304 aa
	CIMG_06979.2	1395951	1396846	306	56.83	88.56	n/a	Coccidioides immitis hypothetical protein similar to beta-glucosidase 4 translation 307 aa
	AN10150	1395945	1396846	304	53.87	89.14	n/a	Aspergillus nidulans AN10150.3 conserved hypothetical protein translation 305 aa
	AO090038000279	1395954	1396846	304	53.11	89.80	n/a	Aspergillus oryzae predicted protein
	gi:70995512:ref:XP_752511.1:	1395951	1396846	305	51.82	89.84	n/a	Aspergillus fumigatus Af293 13-beta-glucanosyltransferase Bgt1
	gi:50427485:ref:XP_462355.1	1395951	1396846	306	41.24	89.54	n/a	Debaryomyces hansenii CBS767 hypothetical protein DEHA0G19943g
	gi:50310395:ref:XP_455217.1	1395951	1396846	311	41.88	89.07	n/a	Kluyveromyces lactis unnamed protein product
	gi:54299396:ref:NP_986324.2	1395951	1396846	307	40.43	90.23	n/a	Eremothecium gossypii AGL343Cp
	lcl:AGL343C	1395951	1396846	307	40.43	90.23	n/a	Ashbya gossypii Syntenic homolog of Saccharomyces cerevisiae YGR282C BGL2 Newly annotated start codon according to experimentaly determined 5 end of mRNA using 5 RACE.
blat_BES	QS0AAD10ZH03RM1	1396715	1397355	926	n/a	n/a	n/a	n/a
blastx_SN15proteins	no results
RepeatMasker_SR	no results
RepeatMasker_LC	no results
sim4_Lm_allest	RS0AAC26YA09FM1	1395982	1396679	640	99.69	100.00	n/a	Lm isolate M1 - V8 (5 days) and minimal medium (8 hours) mycelial library
	RS0AAC25YK17FM1	1395982	1396653	613	100.00	100.00	n/a	Lm isolate M1 - V8 (5 days) and minimal medium (8 hours) mycelial library
	RS0AAC25YG13FM1	1395982	1396660	621	99.84	100.00	n/a	Lm isolate M1 - V8 (5 days) and minimal medium (8 hours) mycelial library
	RS0AAG8YL14CM1	1396120	1396823	645	99.38	100.00	n/a	Lm isolate JN3 - Ungerminated conidia (V8 agar) (insert up to 1kb)
	RS0AAH2YI06CM1	1396345	1396806	403	99.01	100.00	n/a	Lm isolate JN3 - Ungerminated conidia (V8 agar) (insert 1 to 2kb)
	RS0ABA3YD04CM1	1396047	1396793	688	99.56	100.00	n/a	Lm isolate JN3 - cotyledon-pathogen interaction 13 dpi (insert 0.8 to 1.2kb)
	RS0AAA9ZG09FM1	1395698	1396519	765	99.87	100.00	n/a	Lm isolate JN3 - full-length-enriched mycelia grown for 48h in Fries liquid medium
	RS0AAB21YK05FM1	1395673	1396350	621	99.84	100.00	n/a	Lm isolate M1 - mycelia grown for 5 days and 8 hours on oilseed rape juice medium
	RS0AAG6YH20CM1	1395742	1396494	696	99.86	100.00	n/a	Lm isolate JN3 - Ungerminated conidia (V8 agar) (insert up to 1kb)
	RS0AAG8YE11CM1	1395663	1396460	741	99.73	100.00	n/a	Lm isolate JN3 - Ungerminated conidia (V8 agar) (insert up to 1kb)
	RS0AAG13YJ15CM1	1395663	1396443	725	99.45	100.00	n/a	Lm isolate JN3 - Ungerminated conidia (V8 agar) (insert up to 1kb)
	RS0AAG1YK21CM1	1395663	1396416	697	99.71	100.00	n/a	Lm isolate JN3 - Ungerminated conidia (V8 agar) (insert up to 1kb)
	RS0AAG5YN17CM1	1395661	1396402	685	99.56	100.00	n/a	Lm isolate JN3 - Ungerminated conidia (V8 agar) (insert up to 1kb)
	RS0AAG6YN12CM1	1395663	1396390	671	99.70	100.00	n/a	Lm isolate JN3 - Ungerminated conidia (V8 agar) (insert up to 1kb)
	RS0AAG12YB11CM1	1395690	1396363	617	100.00	100.00	n/a	Lm isolate JN3 - Ungerminated conidia (V8 agar) (insert up to 1kb)
	RS0AAH1YO18CM1	1395673	1396368	639	99.53	100.00	n/a	Lm isolate JN3 - Ungerminated conidia (V8 agar) (insert 1 to 2kb)
	RS0AAH3YK21CM1	1395661	1396333	616	99.84	100.00	n/a	Lm isolate JN3 - Ungerminated conidia (V8 agar) (insert 1 to 2kb)
	RS0AAH6YG12CM1	1395667	1396303	580	99.31	100.00	n/a	Lm isolate JN3 - Ungerminated conidia (V8 agar) (insert 1 to 2kb)
	RS0AAH8YC12CM1	1395661	1396283	566	99.47	100.00	n/a	Lm isolate JN3 - Ungerminated conidia (V8 agar) (insert 1 to 2kb)
	RS0ABA14YE06CM1	1395661	1396431	714	99.58	100.00	n/a	Lm isolate JN3 - cotyledon-pathogen interaction 13 dpi (insert 0.8 to 1.2kb)
	RS0ABA7YL19CM1	1395667	1396383	660	99.70	100.00	n/a	Lm isolate JN3 - cotyledon-pathogen interaction 13 dpi (insert 0.8 to 1.2kb)
	RS0ABA8YE21CM1	1395663	1396358	639	99.84	100.00	n/a	Lm isolate JN3 - cotyledon-pathogen interaction 13 dpi (insert 0.8 to 1.2kb)
	RS0ABB10YB13CM1	1395637	1396339	646	99.69	100.00	n/a	Lm isolate JN3 - cotyledon-pathogen interaction 13 dpi (insert 1.2 to 2kb)
	RS0ABB9YE03CM1	1395661	1396299	581	99.83	100.00	n/a	Lm isolate JN3 - cotyledon-pathogen interaction 13 dpi (insert 1.2 to 2kb)
	RS0AAA9ZG09RM1r	1396401	1396965	518	88.56	97.88	n/a	Lm isolate JN3 - full-length-enriched mycelia grown for 48h in Fries liquid medium
	RS0AAB21YC06FM1	1396337	1396953	558	100.00	100.00	n/a	Lm isolate M1 - mycelia grown for 5 days and 8 hours on oilseed rape juice medium
	RS0AAB2YL04FM1	1396301	1396952	593	100.00	100.00	n/a	Lm isolate M1 - mycelia grown for 5 days and 8 hours on oilseed rape juice medium
	RS0AAB9YD03FM1	1396381	1396947	508	100.00	100.00	n/a	Lm isolate M1 - mycelia grown for 5 days and 8 hours on oilseed rape juice medium
	RS0AAB25YE16FM1	1396366	1396947	523	100.00	100.00	n/a	Lm isolate M1 - mycelia grown for 5 days and 8 hours on oilseed rape juice medium
	RS0AAB7YN19FM1	1396279	1396946	609	100.00	100.00	n/a	Lm isolate M1 - mycelia grown for 5 days and 8 hours on oilseed rape juice medium
	RS0AAB26YF05FM1	1396451	1396946	437	100.00	100.00	n/a	Lm isolate M1 - mycelia grown for 5 days and 8 hours on oilseed rape juice medium
	RS0AAB5YF06FM1	1396220	1396937	659	99.85	100.00	n/a	Lm isolate M1 - mycelia grown for 5 days and 8 hours on oilseed rape juice medium
	RS0AAB21YD12FM1	1396218	1396890	614	100.00	100.00	n/a	Lm isolate M1 - mycelia grown for 5 days and 8 hours on oilseed rape juice medium
	RS0AAB14YI24FM1	1396276	1396904	573	98.78	100.00	n/a	Lm isolate M1 - mycelia grown for 5 days and 8 hours on oilseed rape juice medium
	RS0AAB25YI07FM1	1396703	1396947	245	100.00	100.00	n/a	Lm isolate M1 - mycelia grown for 5 days and 8 hours on oilseed rape juice medium
	RS0AAB13YD05FM1	1396720	1396947	228	100.00	100.00	n/a	Lm isolate M1 - mycelia grown for 5 days and 8 hours on oilseed rape juice medium
	RS0AAC3YM21FM1	1396601	1396970	370	99.46	100.00	n/a	Lm isolate M1 - V8 (5 days) and minimal medium (8 hours) mycelial library
	RS0AAC21YA15FM1	1396593	1396947	355	100.00	100.00	n/a	Lm isolate M1 - V8 (5 days) and minimal medium (8 hours) mycelial library
	RS0AAC13YB02FM1	1396625	1396947	323	100.00	100.00	n/a	Lm isolate M1 - V8 (5 days) and minimal medium (8 hours) mycelial library
	RS0AAC1YE22FM1	1396600	1396888	289	100.00	100.00	n/a	Lm isolate M1 - V8 (5 days) and minimal medium (8 hours) mycelial library
	RS0AAC22YO10FM1	1396635	1396888	254	100.00	100.00	n/a	Lm isolate M1 - V8 (5 days) and minimal medium (8 hours) mycelial library
	RS0AAC1YK15FM1	1396827	1396965	158	100.00	87.97	n/a	Lm isolate M1 - V8 (5 days) and minimal medium (8 hours) mycelial library
	RS0AAC21YM12FM1	1396830	1396963	134	100.00	100.00	n/a	Lm isolate M1 - V8 (5 days) and minimal medium (8 hours) mycelial library
	RS0AAC21YB02FM1	1396776	1396888	132	100.00	85.61	n/a	Lm isolate M1 - V8 (5 days) and minimal medium (8 hours) mycelial library
	RS0AAC8YL16FM1	1396840	1396947	108	100.00	100.00	n/a	Lm isolate M1 - V8 (5 days) and minimal medium (8 hours) mycelial library
	RS0AAC11YG03FM1	1396825	1396929	105	100.00	100.00	n/a	Lm isolate M1 - V8 (5 days) and minimal medium (8 hours) mycelial library
	RS0AAC21YF05FM1	1396814	1396888	94	100.00	79.79	n/a	Lm isolate M1 - V8 (5 days) and minimal medium (8 hours) mycelial library
	RS0AAG12YO04CM1	1396301	1396965	606	99.67	100.00	n/a	Lm isolate JN3 - Ungerminated conidia (V8 agar) (insert up to 1kb)
	RS0AAG1YH02CM1	1396311	1396959	590	99.66	100.00	n/a	Lm isolate JN3 - Ungerminated conidia (V8 agar) (insert up to 1kb)
	RS0AAG5YA07CM1	1396612	1396969	358	100.00	100.00	n/a	Lm isolate JN3 - Ungerminated conidia (V8 agar) (insert up to 1kb)
	RS0AAG10YM05CM1	1396454	1396947	435	100.00	100.00	n/a	Lm isolate JN3 - Ungerminated conidia (V8 agar) (insert up to 1kb)
	RS0AAG6YI23CM1	1396700	1396964	265	100.00	100.00	n/a	Lm isolate JN3 - Ungerminated conidia (V8 agar) (insert up to 1kb)
	RS0AAG6YP10CM1	1396800	1396949	150	99.33	100.00	n/a	Lm isolate JN3 - Ungerminated conidia (V8 agar) (insert up to 1kb)
	RS0AAH1YK07CM1	1396167	1396920	695	99.42	100.00	n/a	Lm isolate JN3 - Ungerminated conidia (V8 agar) (insert 1 to 2kb)
	RS0AAH4YF20CM1	1396612	1396964	353	100.00	100.00	n/a	Lm isolate JN3 - Ungerminated conidia (V8 agar) (insert 1 to 2kb)
	RS0AAH10YF05CM1	1396410	1396944	476	99.58	100.00	n/a	Lm isolate JN3 - Ungerminated conidia (V8 agar) (insert 1 to 2kb)
	RS0AAH4YP06CM1	1396454	1396927	415	100.00	100.00	n/a	Lm isolate JN3 - Ungerminated conidia (V8 agar) (insert 1 to 2kb)
	RS0AAH11YF17CM1	1396419	1396924	447	100.00	100.00	n/a	Lm isolate JN3 - Ungerminated conidia (V8 agar) (insert 1 to 2kb)
	RS0AAH3YE14CM1	1396202	1396898	638	99.53	100.00	n/a	Lm isolate JN3 - Ungerminated conidia (V8 agar) (insert 1 to 2kb)
	RS0AAH3YI04CM1	1396651	1396966	316	99.68	100.00	n/a	Lm isolate JN3 - Ungerminated conidia (V8 agar) (insert 1 to 2kb)
	RS0AAH3YE11CM1	1396464	1396888	366	100.00	100.00	n/a	Lm isolate JN3 - Ungerminated conidia (V8 agar) (insert 1 to 2kb)
	RS0ABA5YK08CM2	1396083	1396857	716	99.44	100.00	n/a	Lm isolate JN3 - cotyledon-pathogen interaction 13 dpi (insert 0.8 to 1.2kb)
	RS0ABC5YP21CM1	1396598	1396888	291	100.00	100.00	n/a	Lm isolate JN3 - cotyledon-pathogen interaction 13 dpi (insert superior to 2kb)
	RS0ABC4YK14CM1	1396699	1396945	247	100.00	100.00	n/a	Lm isolate JN3 - cotyledon-pathogen interaction 13 dpi (insert superior to 2kb)
sim4_lm_allest6_clctg	CL_lm_SuperContig_5_v2_lmctg_0723_v2_007.Contig1_v6	1395637	1396970	1218	99.92	100.00	n/a	n/a
sim4_cDNA_BHowlett	no results
blastx_uniprot_sprot	P43070	1395951	1396846	308	39.35	89.94	n/a	Glucan 1 3-beta-glucosidase precursor - Candida albicans (Yeast)
	P15703	1395951	1396846	313	38.27	88.50	n/a	Glucan 1 3-beta-glucosidase precursor - Saccharomyces cerevisiae (Baker's yeast)
	O13990	1395828	1396846	321	34.75	95.02	n/a	Glucan 1 3-beta-glucosidase precursor - Schizosaccharomyces pombe (Fission yeast)
REPET	no results
MUMer_show_coords_lm_WA74	no results