GRS - Genome Report System

Leptosphaeria maculans GRS

Functional annotation

Lema_P051750.1

Gene Identifier

DbXrefs

Domain/Motif (Interproscan results)

Localization / Targeting

Predicted function

Blast based analysis

Analysis	Hit	start	end	length	Note	Hit coverage	Hit length	Hit pident	Hit pcons	eValue	Hit description
blastp_kegg	nfi:NFIA_015650	39	382	344	n/a	99.14	347	67.73	11.34	1e-154	eukaryotic translation initiation factor 3 subunit EifCh putative K03247 translation initiation factor eIF-3 subunit 3
	aor:AO090038000435	4	382	379	n/a	98.90	365	66.48	13.30	1e-153	translation initiation factor 3 subunit h (eIF-3h) K03247 translation initiation factor eIF-3 subunit 3
	ang:An08g01790	4	382	379	n/a	98.90	365	65.65	13.30	1e-153	hypothetical protein K03247 translation initiation factor eIF-3 subunit 3
	afm:AFUA_1G09970	37	382	346	n/a	94.79	365	67.05	11.85	1e-153	eukaryotic translation initiation factor 3 subunit EifCh K03247 translation initiation factor eIF-3 subunit 3
	fgr:FG05614.1	3	380	378	n/a	98.08	364	65.55	15.69	1e-145	hypothetical protein K03247 translation initiation factor eIF-3 subunit 3
	ani:AN1270.2	37	368	332	n/a	91.21	364	64.16	13.25	1e-141	hypothetical protein K03247 translation initiation factor eIF-3 subunit 3
	ssl:SS1G_01190	88	380	293	n/a	79.29	367	70.79	15.81	1e-137	hypothetical protein K03247 translation initiation factor eIF-3 subunit 3
	bfu:BC1G_03240	88	380	293	n/a	79.29	367	69.42	15.81	1e-134	hypothetical protein K03247 translation initiation factor eIF-3 subunit 3
	ncr:NCU07929	1	380	380	n/a	99.44	359	66.67	16.81	1e-116	eukaryotic translation initiation factor 3 subunit 3 K03247 translation initiation factor eIF-3 subunit 3
	mgr:MGG_05156	1	379	379	n/a	82.92	363	66.45	15.95	1e-115	hypothetical protein K03247 translation initiation factor eIF-3 subunit 3
blastp_uniprot_sprot	sp\|Q0UMR2\|EIF3H_PHANO	1	382	382	n/a	100.00	364	89.84	5.77	0.0	Eukaryotic translation initiation factor 3 subunit H OS Phaeosphaeria nodorum GN SNOG_06952 PE 3 SV 3
	sp\|Q1DHB6\|EIF3H_COCIM	39	382	344	n/a	99.14	347	69.48	9.88	1e-158	Eukaryotic translation initiation factor 3 subunit H OS Coccidioides immitis GN CIMG_10297 PE 3 SV 1
	sp\|A1D379\|EIF3H_NEOFI	39	382	344	n/a	99.14	347	67.73	11.34	1e-155	Eukaryotic translation initiation factor 3 subunit H OS Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN NFIA_015650 PE 3 SV 1
	sp\|Q2U2J1\|EIF3H_ASPOR	4	382	379	n/a	98.90	365	66.48	13.30	1e-154	Eukaryotic translation initiation factor 3 subunit H OS Aspergillus oryzae GN AO090038000435 PE 3 SV 1
	sp\|A2QQA2\|EIF3H_ASPNC	4	382	379	n/a	98.90	365	65.65	13.30	1e-154	Eukaryotic translation initiation factor 3 subunit H OS Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN An08g01790 PE 3 SV 1
	sp\|Q4WTA6\|EIF3H_ASPFU	37	382	346	n/a	94.79	365	67.05	11.85	1e-154	Eukaryotic translation initiation factor 3 subunit H OS Aspergillus fumigatus GN AFUA_1G09970 PE 3 SV 1
	sp\|B0XQB9\|EIF3H_ASPFC	37	382	346	n/a	94.79	365	67.05	11.85	1e-154	Eukaryotic translation initiation factor 3 subunit H OS Aspergillus fumigatus (strain CEA10 / CBS 144.89 / FGSC A1163) GN AFUB_009410 PE 3 SV 1
	sp\|A1CQB4\|EIF3H_ASPCL	4	382	379	n/a	98.90	365	65.93	12.19	1e-153	Eukaryotic translation initiation factor 3 subunit H OS Aspergillus clavatus GN ACLA_025520 PE 3 SV 1
	sp\|Q0D1J4\|EIF3H_ASPTN	4	382	379	n/a	98.90	365	65.37	11.36	1e-151	Eukaryotic translation initiation factor 3 subunit H OS Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN ATEG_00190 PE 3 SV 1
	sp\|Q2GZK0\|EIF3H_CHAGB	48	380	333	n/a	90.88	362	69.30	14.29	1e-146	Eukaryotic translation initiation factor 3 subunit H OS Chaetomium globosum GN CHGG_05046 PE 3 SV 1
blastp_pdb	no results
rpsblast_cdd	gnl\|CDD\|128528	55	179	125	Gaps:17	81.48	135	30.00	16.36	9e-07	smart00232 JAB_MPN JAB/MPN domain. Domain in Jun kinase activation domain binding protein and proteasomal subunits. Domain at Mpr1p and Pad1p N-termini. Domain of unknown function.
	gnl\|CDD\|110402	9	147	139	Gaps:31	95.73	117	28.57	19.64	0.012	pfam01398 Mov34 Mov34/MPN/PAD-1 family. Members of this family are found in proteasome regulatory subunits eukaryotic initiation factor 3 (eIF3) subunits and regulators of transcription factors. This family is also known as the MPN domain and PAD-1-like domain. It has been shown that this domain occurs in prokaryotes.
	gnl\|CDD\|136457	101	192	92	Gaps:8	24.48	384	30.85	11.70	0.12	PRK07661 PRK07661 acetyl-CoA acetyltransferase Provisional.
	gnl\|CDD\|110571	269	319	51	Gaps:3	5.59	859	29.17	16.67	2.8	pfam01576 Myosin_tail_1 Myosin tail. The myosin molecule is a multi-subunit complex made up of two heavy chains and four light chains it is a fundamental contractile protein found in all eukaryote cell types. This family consists of the coiled-coil myosin heavy chain tail region. The coiled-coil is composed of the tail from two molecules of myosin. These can then assemble into the macromolecular thick filament. The coiled-coil region provides the structural backbone the thick filament.
	gnl\|CDD\|33364	210	265	56	Gaps:6	15.38	403	29.03	19.35	3.2	COG3562 KpsS Capsule polysaccharide export protein [Cell envelope biogenesis outer membrane].
rpsblast_kog	gnl\|CDD\|36773	37	376	340	Gaps:31	92.33	339	41.21	19.81	3e-63	KOG1560 KOG1560 KOG1560 Translation initiation factor 3 subunit h (eIF-3h) [Translation ribosomal structure and biogenesis].
	gnl\|CDD\|38186	55	243	189	Gaps:40	53.82	288	25.16	21.29	7e-05	KOG2975 KOG2975 KOG2975 Translation initiation factor 3 subunit f (eIF-3f) [Translation ribosomal structure and biogenesis].
	gnl\|CDD\|39537	216	330	115	Gaps:23	31.58	323	23.53	12.75	1.7	KOG4336 KOG4336 KOG4336 TBP-associated transcription factor Prodos [Transcription].
	gnl\|CDD\|39570	224	352	129	Gaps:14	5.40	2131	24.35	19.13	2.0	KOG4369 KOG4369 KOG4369 RTK signaling protein MASK/UNC-44 [Signal transduction mechanisms].
	gnl\|CDD\|35620	241	300	60	Gaps:3	2.75	2142	27.12	18.64	2.9	KOG0399 KOG0399 KOG0399 Glutamate synthase [Amino acid transport and metabolism].

Other analysis

Functional Gbrowse

Structural Gbrowse

Genome Mapping at gene locus

Analysis	Hit name	RefStart	RefEnd	Hit length	Hit identity	Hit coverage	eValue	Hit description
blastx_uniprot_trembl	Q0UMR2	599070	600329	1154	89.84	31.54	n/a	Putative uncharacterized protein - Phaeosphaeria nodorum (Septoria nodorum)
	A6R146	599238	600329	365	68.50	94.79	n/a	Putative uncharacterized protein - Ajellomyces capsulata (strain NAm1) (Histoplasma capsulatum)
	Q1DHB6	599244	600329	347	70.64	99.14	n/a	Putative uncharacterized protein - Coccidioides immitis
	A7E7B3	599070	600323	367	66.76	99.18	n/a	Putative uncharacterized protein - Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) (White mold) (Whetzelinia sclerotiorum)
	A6RQZ9	599070	600323	367	65.93	99.18	n/a	Putative uncharacterized protein - Botryotinia fuckeliana (strain B05.10) (Noble rot fungus) (Botrytis cinerea)
	A1D379	599244	600329	347	67.73	99.14	n/a	Eukaryotic translation initiation factor 3 subunit EifCh putative - Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / NRRL 181) (Aspergillus fischerianus (strain ATCC 1020 / DSM 3700 / NRRL 181))
	Q2U2J1	599079	600329	365	67.59	98.90	n/a	Translation initiation factor 3 - Aspergillus oryzae
	Q7S9Y9	599070	600323	359	66.48	99.72	n/a	Eukaryotic translation initiation factor 3 subunit 3 - Neurospora crassa
	A2QQA2	599079	600329	365	65.65	98.90	n/a	Complex: TIF3H1 in A. thaliana is part of the heterodecameric eIF3 complex - Aspergillus niger
	Q4WTA6	599238	600329	365	67.05	94.79	n/a	Eukaryotic translation initiation factor 3 subunit EifCh putative - Aspergillus fumigatus (Sartorya fumigata)
	Q0UMR2	599070	600329	1154	89.84	31.54	n/a	Putative uncharacterized protein - Phaeosphaeria nodorum (Septoria nodorum)
	A7E7B3	599070	600323	367	66.76	99.18	n/a	Putative uncharacterized protein - Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) (White mold) (Whetzelinia sclerotiorum)
	A6RQZ9	599070	600323	367	65.93	99.18	n/a	Putative uncharacterized protein - Botryotinia fuckeliana (strain B05.10) (Noble rot fungus) (Botrytis cinerea)
	Q7S9Y9	599070	600323	359	66.48	99.72	n/a	Eukaryotic translation initiation factor 3 subunit 3 - Neurospora crassa
blastx_FNG31_prot	SNU06950.1	599070	600329	364	89.84	100.00	n/a	Stagonospora nodorum hypothetical protein translation
	CIMG_10297.2	599244	600329	347	70.64	99.14	n/a	Coccidioides immitis hypothetical protein translation 348 aa
	SS1G_01190.1	599070	600323	367	66.76	99.18	n/a	sclerotinia_sclerotiorum hypothetical protein translation 368 aa
	BC1G_03240.1	599070	600323	367	65.93	99.18	n/a	Botrytis cinerea hypothetical protein translation 368 aa
	AO090038000435	599079	600329	365	67.59	98.90	n/a	Aspergillus oryzae translation initiation factor 3 subunit h eIF-3h
	NCU07929.2	599070	600323	359	66.48	99.72	n/a	Neurospora crassa hypothetical protein translation 360 aa
	gi:70995199:ref:XP_752364.1:	599238	600329	365	67.05	94.79	n/a	Aspergillus fumigatus Af293 eukaryotic translation initiation factor 3 subunit EifCh
	CHG05046.1	599271	600323	362	69.09	91.16	n/a	Chaetomium globosum conserved hypothetical protein translation 363 aa
	jgi:Triree:45463	599070	600323	360	66.02	99.72	n/a	Trichoderma reesei
	FG05614.1	599070	600323	364	65.01	99.73	n/a	fusarium_graminearum hypothetical protein 365 aa
	SNU06950.1	599070	600329	364	89.84	100.00	n/a	Stagonospora nodorum hypothetical protein translation
	SS1G_01190.1	599070	600323	367	66.76	99.18	n/a	sclerotinia_sclerotiorum hypothetical protein translation 368 aa
	BC1G_03240.1	599070	600323	367	65.93	99.18	n/a	Botrytis cinerea hypothetical protein translation 368 aa
	NCU07929.2	599070	600323	359	66.48	99.72	n/a	Neurospora crassa hypothetical protein translation 360 aa
	jgi:Triree:45463	599070	600323	360	66.02	99.72	n/a	Trichoderma reesei
	FG05614.1	599070	600323	364	65.01	99.73	n/a	fusarium_graminearum hypothetical protein 365 aa
blat_BES	QS0AAE151ZD05FM1	598785	599541	848	n/a	n/a	n/a	n/a
blastx_SN15proteins	gnl:WGS:AAGI:SNOT_06952.2:gb:EAT85603	599070	600329	1154	89.84	31.54	n/a	n/a
blastx_SN15proteins	gnl:WGS:AAGI:SNOT_06952.2:gb:EAT85603	599070	600329	1154	89.84	31.54	n/a	n/a
RepeatMasker_SR	no results
RepeatMasker_LC	no results
sim4_Lm_allest	no results
sim4_lm_allest6_clctg	no results
sim4_cDNA_BHowlett	no results
blastx_uniprot_sprot	Q9UT48	599271	600311	357	37.85	88.80	n/a	Putative eukaryotic translation initiation factor 3 subunit H - Schizosaccharomyces pombe (Fission yeast)
	O15372	599292	600311	352	36.88	80.11	n/a	Eukaryotic translation initiation factor 3 subunit H - Homo sapiens (Human)
	Q56JZ5	599292	600311	352	36.88	80.11	n/a	Eukaryotic translation initiation factor 3 subunit H - Bos taurus (Bovine)
	Q91WK2	599292	600311	352	36.52	80.11	n/a	Eukaryotic translation initiation factor 3 subunit H - Mus musculus (Mouse)
REPET	no results
MUMer_show_coords_lm_WA74	no results