GRS - Genome Report System

Leptosphaeria maculans GRS

Functional annotation

Lema_P029750.1

Gene Identifier

DbXrefs

Domain/Motif (Interproscan results)

Localization / Targeting

Predicted function

Blast based analysis

Analysis	Hit	start	end	length	Note	Hit coverage	Hit length	Hit pident	Hit pcons	eValue	Hit description
blastp_kegg	ncr:NCU06245	11	577	567	n/a	63.70	675	55.12	14.19	1e-127	similar to phosphatidyl inositol-specific phospholipase C
	pan:PODANSg5297	85	614	530	n/a	66.05	651	55.81	13.95	1e-125	hypothetical protein
	mgr:MGG_05332	92	614	523	n/a	59.07	706	54.44	17.27	1e-121	hypothetical protein
	afm:AFUA_3G07940	88	614	527	n/a	66.26	652	51.16	14.35	1e-113	phosphoinositide-specific phospholipase C (EC:3.1.4.-) K01128
	nfi:NFIA_069230	88	614	527	n/a	65.18	649	51.77	14.42	1e-112	phosphoinositide-specific phospholipase C putative
	ang:An02g11290	88	625	538	n/a	66.33	594	55.58	13.96	1e-112	hypothetical protein
	ssl:SS1G_03548	39	614	576	n/a	63.99	686	50.34	16.40	1e-111	hypothetical protein
	mgr:MGG_08315	88	613	526	n/a	56.92	636	56.35	12.43	1e-106	hypothetical protein
	fgr:FG03886.1	95	616	522	n/a	60.22	631	53.16	14.21	1e-103	hypothetical protein
	fgr:FG06693.1	92	614	523	n/a	74.88	633	50.00	15.19	1e-101	hypothetical protein
blastp_uniprot_sprot	sp\|O13433\|PLC1_CANAL	114	490	377	n/a	24.75	1099	45.22	18.38	7e-53	1-phosphatidylinositol-4 5-bisphosphate phosphodiesterase 1 OS Candida albicans GN PLC1 PE 4 SV 1
	sp\|P40977\|PLC1_SCHPO	111	556	446	n/a	30.70	899	42.03	20.29	1e-50	1-phosphatidylinositol-4 5-bisphosphate phosphodiesterase 1 OS Schizosaccharomyces pombe GN plc1 PE 1 SV 1
	sp\|P25455\|PIP1_DROME	111	490	380	n/a	20.33	1318	40.30	13.81	5e-43	1-phosphatidylinositol-4 5-bisphosphate phosphodiesterase classes I and II OS Drosophila melanogaster GN Plc21C PE 2 SV 3
	sp\|Q8K4S1\|PLCE1_MOUSE	115	495	381	n/a	9.77	2282	44.39	15.25	5e-42	1-phosphatidylinositol-4 5-bisphosphate phosphodiesterase epsilon-1 OS Mus musculus GN Plce1 PE 1 SV 2
	sp\|Q99P84\|PLCE1_RAT	111	495	385	n/a	9.95	2281	44.05	14.54	2e-41	1-phosphatidylinositol-4 5-bisphosphate phosphodiesterase epsilon-1 OS Rattus norvegicus GN Plce1 PE 1 SV 1
	sp\|Q15147\|PLCB4_HUMAN	114	494	381	n/a	19.66	1175	42.86	16.02	4e-41	1-phosphatidylinositol-4 5-bisphosphate phosphodiesterase beta-4 OS Homo sapiens GN PLCB4 PE 1 SV 3
	sp\|Q9QW07\|PLCB4_RAT	114	494	381	n/a	19.66	1175	42.86	16.02	5e-41	1-phosphatidylinositol-4 5-bisphosphate phosphodiesterase beta-4 OS Rattus norvegicus GN Plcb4 PE 2 SV 2
	sp\|Q9P212\|PLCE1_HUMAN	115	495	381	n/a	9.69	2302	44.84	14.35	1e-40	1-phosphatidylinositol-4 5-bisphosphate phosphodiesterase epsilon-1 OS Homo sapiens GN PLCE1 PE 1 SV 3
	sp\|Q8SPR7\|PLCD4_PIG	111	566	456	n/a	29.27	772	47.35	16.37	3e-40	1-phosphatidylinositol-4 5-bisphosphate phosphodiesterase delta-4 OS Sus scrofa GN PLCD4 PE 2 SV 1
	sp\|Q07722\|PLCB4_BOVIN	114	494	381	n/a	22.97	1023	41.28	17.02	3e-40	1-phosphatidylinositol-4 5-bisphosphate phosphodiesterase beta-4 (Fragment) OS Bos taurus GN PLCB4 PE 1 SV 1
blastp_pdb	2zkm_X	111	494	384	n/a	29.91	799	40.59	17.99	1e-38	mol:protein length:799 1-phosphatidylinositol-4 5-bisphosphate phosp
	2fju_B	111	494	384	n/a	29.91	799	40.59	17.99	1e-38	mol:protein length:799 1-phosphatidylinositol-4 5-bisphosphate phosp
	1qat_B	111	495	385	n/a	31.67	622	43.15	13.20	3e-35	mol:protein length:622 PHOSPHOLIPASE C DELTA-1
	1qat_A	111	495	385	n/a	31.67	622	43.15	13.20	3e-35	mol:protein length:622 PHOSPHOLIPASE C DELTA-1
	1qas_B	111	495	385	n/a	31.67	622	43.15	13.20	3e-35	mol:protein length:622 PHOSPHOLIPASE C DELTA-1
	1qas_A	111	495	385	n/a	31.67	622	43.15	13.20	3e-35	mol:protein length:622 PHOSPHOLIPASE C DELTA-1
	2isd_B	111	495	385	n/a	31.57	624	43.15	13.20	3e-35	mol:protein length:624 PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C IS
	2isd_A	111	495	385	n/a	31.57	624	43.15	13.20	3e-35	mol:protein length:624 PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C IS
	1djz_B	111	495	385	n/a	31.57	624	43.15	13.20	3e-35	mol:protein length:624 PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C IS
	1djz_A	111	495	385	n/a	31.57	624	43.15	13.20	3e-35	mol:protein length:624 PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C IS
rpsblast_cdd	gnl\|CDD\|128454	392	501	110	Gaps:3	98.26	115	39.82	14.16	1e-26	smart00149 PLCYc Phospholipase C catalytic domain (part) domain Y. Phosphoinositide-specific phospholipases C. These enzymes contain 2 regions (X and Y) which together form a TIM barrel-like structure containing the active site residues. Phospholipase C enzymes (PI-PLC) act as signal transducers that generate two second messengers inositol-1 4 5-trisphosphate and diacylglycerol. The bacterial enzyme [6] appears to be a homologue of the mammalian PLCs.
	gnl\|CDD\|73182	111	494	384	Gaps:69	98.00	250	41.22	13.47	2e-26	cd00137 PLCc Phospholipase C catalytic domain Phosphoinositide-specific phospholipases C catalyze hydrolysis of phosphatidylinositol-4 5-bisphosphate (PIP2) to D-myo-inositol-1 4 5-trisphosphate (1 4 5-IP3) and sn-1 2-diacylglycerol (DAG). Both products function as second messengers in eukaryotic signal transduction cascades. 1 4 5-IP3 triggers inflow of calcium from intracellular stores the membrane resident product DAG controls cellular protein phosphorylation states by activating various protein kinase C isozymes. The enzyme comprises 2 regions (X and Y) connected via a linker which may contain inserted domains X and Y together form a TIM barrel-like structure containing the active site residues..
	gnl\|CDD\|109445	391	501	111	Gaps:3	96.61	118	39.47	8.77	4e-25	pfam00387 PI-PLC-Y Phosphatidylinositol-specific phospholipase C Y domain. This associates with pfam00388 to form a single structural unit.
	gnl\|CDD\|128453	111	321	211	Gaps:4	97.78	135	44.70	15.91	6e-18	smart00148 PLCXc Phospholipase C catalytic domain (part) domain X. Phosphoinositide-specific phospholipases C. These enzymes contain 2 regions (X and Y) which together form a TIM barrel-like structure containing the active site residues. Phospholipase C enzymes (PI-PLC) act as signal transducers that generate two second messengers inositol-1 4 5-trisphosphate and diacylglycerol. The bacterial enzyme [6] appears to be a homologue of the mammalian PLCs.
	gnl\|CDD\|109446	113	332	220	Gaps:4	98.61	144	47.18	18.31	1e-15	pfam00388 PI-PLC-X Phosphatidylinositol-specific phospholipase C X domain. This associates with pfam00387 to form a single structural unit.
rpsblast_kog	gnl\|CDD\|35390	88	600	513	Gaps:38	55.63	746	34.46	13.01	3e-50	KOG0169 KOG0169 KOG0169 Phosphoinositide-specific phospholipase C [Signal transduction mechanisms].
	gnl\|CDD\|36479	78	614	537	Gaps:95	41.38	1189	31.30	14.43	8e-37	KOG1265 KOG1265 KOG1265 Phospholipase C [Lipid transport and metabolism].
	gnl\|CDD\|36478	89	555	467	Gaps:16	26.44	1267	36.72	17.31	2e-17	KOG1264 KOG1264 KOG1264 Phospholipase C [Lipid transport and metabolism].
	gnl\|CDD\|38908	333	453	121	Gaps:5	33.33	360	22.50	10.83	0.46	KOG3704 KOG3704 KOG3704 Heparan sulfate D-glucosaminyl 3-O-sulfotransferase [Posttranslational modification protein turnover chaperones].
	gnl\|CDD\|35828	304	385	82	n/a	7.93	1034	19.51	13.41	1.7	KOG0608 KOG0608 KOG0608 Warts/lats-like serine threonine kinases [Cell cycle control cell division chromosome partitioning].

Other analysis

Functional Gbrowse

Structural Gbrowse

Genome Mapping at gene locus

Analysis	Hit name	RefStart	RefEnd	Hit length	Hit identity	Hit coverage	eValue	Hit description
blastx_uniprot_trembl	Q0UVV5	1969539	1971365	617	70.56	98.54	n/a	Putative uncharacterized protein - Phaeosphaeria nodorum (Septoria nodorum)
	Q7SBR2	1969554	1971365	675	44.53	96.15	n/a	Putative uncharacterized protein - Neurospora crassa
	Q45UR7	1969554	1971365	710	44.53	91.41	n/a	Phospholipase C - Neurospora crassa
	Q45UR9	1969554	1971365	710	44.53	91.41	n/a	Phospholipase C - Neurospora crassa
	Q45UR8	1969554	1971365	710	44.53	91.41	n/a	Phospholipase C - Neurospora crassa
	Q45UR3	1969554	1971365	711	44.46	91.42	n/a	Phospholipase C - Neurospora crassa
	Q45UR2	1969554	1971365	711	44.46	91.42	n/a	Phospholipase C - Neurospora crassa
	Q45UQ7	1969554	1971365	711	44.46	91.42	n/a	Phospholipase C - Neurospora crassa
	Q45UQ8	1969554	1971365	706	43.72	91.36	n/a	Phospholipase C - Neurospora crassa
	Q45UR1	1969554	1971365	711	44.46	91.42	n/a	Phospholipase C - Neurospora crassa
blastx_FNG31_prot	SNU04109.1	1969539	1971365	617	70.56	98.54	n/a	Stagonospora nodorum hypothetical protein translation
	NCU06245.2	1969554	1971365	710	44.53	91.41	n/a	Neurospora crassa hypothetical protein translation 711 aa
	FG06693.1	1969578	1971365	633	47.05	91.00	n/a	fusarium_graminearum hypothetical protein 634 aa
	CHG05841.1	1969584	1971365	1065	45.78	57.84	n/a	Chaetomium globosum hypothetical protein translation 1066 aa
	MGG_05332.5	1969584	1971365	706	43.39	91.08	n/a	magnaporthe_grisea hypothetical protein translation 707 aa
	jgi:Triree:35937	1969797	1971365	691	48.48	76.12	n/a	Trichoderma reesei
	SS1G_03548.1	1969638	1971389	686	41.45	88.63	n/a	sclerotinia_sclerotiorum hypothetical protein translation 687 aa
	CIMG_02341.2	1969626	1971365	654	41.65	88.84	n/a	Coccidioides immitis hypothetical protein translation 655 aa
	gi:71000251:ref:XP_754820.1:	1969785	1971365	652	45.73	80.83	n/a	Aspergillus fumigatus Af293 phosphoinositide-specific phospholipase C
	MGG_08315.5	1969785	1971362	636	45.10	80.19	n/a	magnaporthe_grisea hypothetical protein translation 637 aa
blat_BES	QS0AAD30ZD09FM1	1969562	1970309	820	n/a	n/a	n/a	n/a
	QS0AAE115ZF08RM1	1970585	1971154	1187	n/a	n/a	n/a	n/a
	QS0AAD12ZH05FM1	1968850	1969569	914	n/a	n/a	n/a	n/a
blastx_SN15proteins	gnl:WGS:AAGI:SNOT_04109.2:gb:EAT87869	1969539	1971365	617	70.56	98.54	n/a	n/a
	gnl:WGS:AAGI:SNOT_09944.2:gb:EAT82279	1970229	1971176	573	37.05	53.23	n/a	n/a
	gnl:WGS:AAGI:SNOT_10714.2:gb:EAT82108	1970649	1971191	980	35.29	19.08	n/a	n/a
RepeatMasker_SR	no results
RepeatMasker_LC	no results
sim4_Lm_allest	BG370079	1969341	1969915	498	98.39	100.00	n/a	Lm isolate M1 - V8 mycelial library - 5_prime sequencing (from EMBL)
sim4_lm_allest6_clctg	BG370079	1969341	1969915	498	98.39	100.00	n/a	Lm isolate M1 - V8 mycelial library - 5_prime sequencing (from EMBL)
sim4_cDNA_BHowlett	no results
blastx_uniprot_sprot	O13433	1970235	1971188	1099	33.83	30.39	n/a	1-phosphatidylinositol-4 5-bisphosphate phosphodiesterase 1 - Candida albicans (Yeast)
	P40977	1970238	1971191	899	35.29	34.04	n/a	1-phosphatidylinositol-4 5-bisphosphate phosphodiesterase 1 - Schizosaccharomyces pombe (Fission yeast)
	Q8SPR7	1970235	1971239	772	32.05	43.65	n/a	1-phosphatidylinositol-4 5-bisphosphate phosphodiesterase delta-4 - Sus scrofa (Pig)
	Q02158	1970235	1971188	801	30.61	41.20	n/a	1-phosphatidylinositol-4 5-bisphosphate phosphodiesterase - Dictyostelium discoideum (Slime mold)
	Q9BRC7	1970235	1971188	762	32.38	41.34	n/a	1-phosphatidylinositol-4 5-bisphosphate phosphodiesterase delta-4 - Homo sapiens (Human)
	Q8K2J0	1970235	1971239	785	33.12	40.76	n/a	1-phosphatidylinositol-4 5-bisphosphate phosphodiesterase delta-3 - Mus musculus (Mouse)
	Q8K394	1970235	1971191	1128	32.14	27.30	n/a	Inactive phospholipase C-like protein 2 - Mus musculus (Mouse)
	Q9UPR0	1970235	1971191	1127	32.14	27.33	n/a	Inactive phospholipase C-like protein 2 - Homo sapiens (Human)
	Q5RET0	1970235	1971188	762	31.75	41.34	n/a	1-phosphatidylinositol-4 5-bisphosphate phosphodiesterase delta-4 - Pongo pygmaeus (Orangutan)
	Q8N3E9	1970235	1971191	789	33.11	38.28	n/a	1-phosphatidylinositol-4 5-bisphosphate phosphodiesterase delta-3 - Homo sapiens (Human)
REPET	no results
MUMer_show_coords_lm_WA74	no results