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Uclust

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  • uclust

Uclust


UCLUST is a high-performance clustering, alignment and search algorithm that is capable of handling millions of sequences.

Applications include:

  • Generating non-redundant protein and nucleotide sequence databases.
  • OTU-picking by clustering 16S/18S rRNA sequences.
  • Clustering reads from meta-genomic and environmental sequencing studies.
  • Taxonomy assignment of sequences to curated databases such as Greengenes , RDP and SILVA .
  • Phylogenetic analysis of very large sequence sets.

Access mode(s):

Command line on saruman.versailles.inra.fr


Creation date: 06 Jan 2012