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Picard Tools

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command

  • java -Xmx2g -jar /share/apps/picard-tools-1.106/Tool.jar

Picard Tools


SAM (Sequence Alignment/Map) format is a generic format for storing large nucleotide sequence alignments. SAM is described in the  SAMtools project page .

Picard comprises Java-based command-line utilities that manipulate SAM files, and a Java API (SAM-JDK) for creating new programs that read and write SAM files. Both SAM text format and SAM binary (BAM) format are supported.

Picard does not have its own mailing lists. Please use the  SAMTools mailing Lists  for Picard-related correspondence.


Access mode(s):

Command line on saruman.versailles.inra.fr


Creation date: 04 Feb 2014