| Analysis | rpsblast_cdd | Start | 220 |
| End | 319 | Strand | + |
| Length | 100 | Note | Gaps:8 |
| Hit Coverage | 99.08 | Hit Length | 109 |
| Hit Pident | 48.15 | E Val | 1e-26 |
| Hit Description | pfam07717 OB_NTP_bind Oligonucleotide/oligosaccharide-binding (OB)-fold. This family is found towards the C-terminus of the DEAD-box helicases (pfam00270). In these helicases it is apparently always found in association with pfam04408. There do seem to be a couple of instances where it occurs by itself - . The structure PDB:3i4u adopts an OB-fold. helicases (pfam00270). In these helicases it is apparently always found in association with pfam04408. This C-terminal domain of the yeast helicase contains an oligonucleotide/oligosaccharide-binding (OB)-fold which seems to be placed at the entrance of the putative nucleic acid cavity. It also constitutes the binding site for the G-patch-containing domain of Pfa1p. When found on DEAH/RHA helicases this domain is central to the regulation of the helicase activity through its binding of both RNA and G-patch domain proteins. | Hit Pcons | 15.74 |
| Name | Qrob_P0632720.2 |
| Protein Identifier |
Organism . Name |
Score | Score Type | Protein Description | Alias (in v1) | Code Enzyme | Gene Prediction Quality |
|---|---|---|---|---|---|---|---|
| Qrob_P0632720.2 | Quercus robur | 0.0 | egn | (M=2) K12813 - pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 [EC:3.6.4.13] | EC:3.6.4.13 | validated |
Powered by
