| Analysis | rpsblast_cdd | Start | 314 |
| End | 648 | Strand | + |
| Length | 335 | Note | Gaps:102 |
| Hit Coverage | 100.00 | Hit Length | 289 |
| Hit Pident | 37.37 | E Val | 3e-25 |
| Hit Description | cd00200 WD40 WD40 domain found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction pre-mRNA processing and cytoskeleton assembly typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long hence the name WD40 between GH and WD lies a conserved core serves as a stable propeller-like platform to which proteins can bind either stably or reversibly forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet instances with few detectable copies are hypothesized to form larger structures by dimerization each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands 7 copies of the repeat are present in this alignment.. | Hit Pcons | 21.45 |
| Name | Qrob_P0628690.2 |
| Protein Identifier |
Organism . Name |
Score | Score Type | Protein Description | Alias (in v1) | Code Enzyme | Gene Prediction Quality |
|---|---|---|---|---|---|---|---|
| Qrob_P0628690.2 | Quercus robur | 100.0 | egn | (M=1) K14824 - ribosome biogenesis protein ERB1 | validated |
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