| Analysis | rpsblast_cdd | Start | 23 |
| End | 415 | Strand | + |
| Length | 393 | Note | Gaps:43 |
| Hit Coverage | 35.40 | Hit Length | 1164 |
| Hit Pident | 22.09 | E Val | 6e-12 |
| Hit Description | TIGR02169 SMC_prok_A chromosome segregation protein SMC primarily archaeal type. SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria archaea and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes but six paralogs (excluded from this family) are found in eukarotes where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex Synechocystis etc) the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved but the central hinge region is skewed in composition and highly divergent. | Hit Pcons | 21.84 |
| Name | Qrob_P0595290.2 |
| Protein Identifier |
Organism . Name |
Score | Score Type | Protein Description | Alias (in v1) | Code Enzyme | Gene Prediction Quality |
|---|---|---|---|---|---|---|---|
| Qrob_P0595290.2 | Quercus robur | 94.1 | egn | (M=1) PTHR19306:SF1 - STRUCTURAL MAINTENANCE OF CHROMOSOMES 5 SMC5 | validated |
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