| Analysis | rpsblast_cdd | Start | 113 |
| End | 214 | Strand | + |
| Length | 102 | Note | Gaps:7 |
| Hit Coverage | 98.98 | Hit Length | 98 |
| Hit Pident | 31.96 | E Val | 6e-17 |
| Hit Description | cd10017 B3_DNA Plant-specific B3-DNA binding domain. The plant-specific B3 DNA binding domain superfamily includes the well-characterized auxin response factor (ARF) and the LAV (Leafy cotyledon2 [LEC2]-Abscisic acid insensitive3 [ABI3]-VAL) families as well as the RAV (Related to ABI3 and VP1) and REM (REproductive Meristem) families. LEC2 and ABI3 have been shown to be involved in seed development while other members of the LAV family seem to have a more general role being expressed in many organs during plant development. Members of the ARF family bind to the auxin response element and depending on presence of an activation or repression domain they activate or repress transcription. RAV and REM families are less studied B3 protein famillies. | Hit Pcons | 11.34 |
| Name | Qrob_P0535990.2 |
| Protein Identifier |
Organism . Name |
Score | Score Type | Protein Description | Alias (in v1) | Code Enzyme | Gene Prediction Quality |
|---|---|---|---|---|---|---|---|
| Qrob_P0535990.2 | Quercus robur | (M=7) PF02309//PF02362//PF06507 - AUX/IAA family // B3 DNA binding domain // Auxin response factor | Qrob_P0022560.1 | manual_v1 |
Powered by
