| Analysis | rpsblast_cdd | Start | 46 |
| End | 276 | Strand | + |
| Length | 231 | Note | none |
| Hit Coverage | 100.00 | Hit Length | 231 |
| Hit Pident | 73.16 | E Val | 1e-126 |
| Hit Description | cd01882 BMS1 Bms1 an essential GTPase promotes assembly of preribosomal RNA processing complexes. Bms1 is an essential evolutionarily conserved nucleolar protein. Its depletion interferes with processing of the 35S pre-rRNA at sites A0 A1 and A2 and the formation of 40S subunits. Bms1 the putative endonuclease Rc11 and the essential U3 small nucleolar RNA form a stable subcomplex that is believed to control an early step in the formation of the 40S subumit. The C-terminal domain of Bms1 contains a GTPase-activating protein (GAP) that functions intramolecularly. It is believed that Rc11 activates Bms1 by acting as a guanine-nucleotide exchange factor (GEF) to promote GDP/GTP exchange and that activated (GTP-bound) Bms1 delivers Rc11 to the preribosomes. | Hit Pcons | 12.55 |
| Name | Qrob_P0490980.2 |
| Protein Identifier |
Organism . Name |
Score | Score Type | Protein Description | Alias (in v1) | Code Enzyme | Gene Prediction Quality |
|---|---|---|---|---|---|---|---|
| Qrob_P0490980.2 | Quercus robur | 43.1 | egn | (M=2) K14569 - ribosome biogenesis protein BMS1 | validated |
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