Blast Analysis : gnl|CDD|176546

Analysis	rpsblast_cdd	Start	6
End	51	Strand	+
Length	46	Note	none
Hit Coverage	15.33	Hit Length	300
Hit Pident	60.87	E Val	7e-15
Hit Description	cd08604 GDPD_SHV3_repeat_2 Glycerophosphodiester phosphodiesterase domain repeat 2 of glycerophosphodiester phosphodiesterase-like protein SHV3 and SHV3-like proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) repeat 2 present in glycerophosphodiester phosphodiesterase (GP-GDE)-like protein SHV3 and SHV3-like proteins (SVLs) which may play important an role in cell wall organization. The prototype of this family is a glycosylphosphatidylinositol (GPI) anchored protein SHV3 encoded by shaven3 (shv3) gene from Arabidopsis thaliana. Members in this family show sequence homology to bacterial GP-GDEs (EC 3.1.4.46) that catalyze the hydrolysis of various glycerophosphodiesters and produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. Both SHV3 and SVLs have two tandemly repeated GDPD domains whose biochemical functions remain unclear. The residues essential for interactions with the substrates and calcium ions in bacterial GP-GDEs are not conserved in SHV3 and SVLs which suggests that the function of GDPD domains in these proteins might be distinct from those in typical bacterial GP-GDEs. In addition the two tandem repeats show low sequence similarity to each other suggesting they have different biochemical function. Most of the members of this family are Arabidopsis-specific gene products. To date SHV3 orthologues are only found in Physcomitrella patens. This CD includes domain II (the second GDPD domain of SHV3 and SVLs) which is necessary for SHV3 function.	Hit Pcons	19.57
Name	Qrob_P0458470.2

1 Protein

Protein Identifier	Organism . Name	Score	Score Type	Protein Description	Alias (in v1)	Code Enzyme	Gene Prediction Quality
Qrob_P0458470.2	Quercus robur	17.2	egn	(M=17) PF00560//PF13516 - Leucine Rich Repeat // Leucine Rich repeat			validated

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