| Analysis | rpsblast_cdd | Start | 375 |
| End | 1033 | Strand | + |
| Length | 659 | Note | Gaps:142 |
| Hit Coverage | 68.52 | Hit Length | 899 |
| Hit Pident | 33.60 | E Val | 1e-11 |
| Hit Description | TIGR02917 PEP_TPR_lipo putative PEP-CTERM system TPR-repeat lipoprotein. This protein family occurs in strictly within a subset of Gram-negative bacterial species with the proposed PEP-CTERM/exosortase system analogous to the LPXTG/sortase system common in Gram-positive bacteria. This protein occurs in a species if and only if a transmembrane histidine kinase (TIGR02916) and a DNA-binding response regulator (TIGR02915) also occur. The present of tetratricopeptide repeats (TPR) suggests protein-protein interaction possibly for the regulation of PEP-CTERM protein expression since many PEP-CTERM proteins in these genomes are preceded by a proposed DNA binding site for the response regulator. | Hit Pcons | 21.27 |
| Name | Qrob_P0446550.2 |
| Protein Identifier |
Organism . Name |
Score | Score Type | Protein Description | Alias (in v1) | Code Enzyme | Gene Prediction Quality |
|---|---|---|---|---|---|---|---|
| Qrob_P0446550.2 | Quercus robur | 35.2 | egn | (M=2) K12855 - pre-mRNA-processing factor 6 | validated |
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