| Analysis | rpsblast_cdd | Start | 76 |
| End | 136 | Strand | + |
| Length | 61 | Note | none |
| Hit Coverage | 95.31 | Hit Length | 64 |
| Hit Pident | 68.85 | E Val | 2e-23 |
| Hit Description | cd04451 S1_IF1 S1_IF1: Translation Initiation Factor IF1 S1-like RNA-binding domain. IF1 contains an S1-like RNA-binding domain which is found in a wide variety of RNA-associated proteins. Translation initiation includes a number of interrelated steps preceding the formation of the first peptide bond. In Escherichia coli the initiation mechanism requires in addition to mRNA fMet-tRNA and ribosomal subunits the presence of three additional proteins (initiation factors IF1 IF2 and IF3) and at least one GTP molecule. The three initiation factors influence both the kinetics and the stability of ternary complex formation. IF1 is the smallest of the three factors. IF1 enhances the rate of 70S ribosome subunit association and dissociation and the interaction of 30S ribosomal subunit with IF2 and IF3. It stimulates 30S complex formation. In addition by binding to the A-site of the 30S ribosomal subunit IF1 may contribute to the fidelity of the selection of the initiation site of the mRNA.. | Hit Pcons | 11.48 |
| Name | Qrob_P0441290.2 |
| Protein Identifier |
Organism . Name |
Score | Score Type | Protein Description | Alias (in v1) | Code Enzyme | Gene Prediction Quality |
|---|---|---|---|---|---|---|---|
| Qrob_P0441290.2 | Quercus robur | 100.0 | egn | (M=4) PF01176 - Translation initiation factor 1A / IF-1 | validated |
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