| Analysis | rpsblast_cdd | Start | 509 |
| End | 576 | Strand | + |
| Length | 68 | Note | none |
| Hit Coverage | 34.87 | Hit Length | 195 |
| Hit Pident | 42.65 | E Val | 4e-13 |
| Hit Description | pfam09169 BRCA-2_helical BRCA2 helical. Members of this family adopt a helical structure consisting of a four-helix cluster core (alpha 1 alpha 8 alpha 9 alpha 10) and two successive beta-hairpins (beta 1 to beta 4). An approx. 50-amino acid segment that contains four short helices (alpha 2 to alpha 4) meanders around the surface of the core structure. In BRCA2 the alpha 9 and alpha 10 helices pack with BRCA-2_OB1 (pfam09103) through van der Waals contacts involving hydrophobic and aromatic residues and also through side-chain and backbone hydrogen bonds. The domain binds the 70-amino acid DSS1 (deleted in split-hand/split foot syndrome) protein which was originally identified as one of three genes that map to a 1.5-Mb locus deleted in an inherited developmental malformation syndrome. | Hit Pcons | 16.18 |
| Name | Qrob_P0383020.2 |
| Protein Identifier |
Organism . Name |
Score | Score Type | Protein Description | Alias (in v1) | Code Enzyme | Gene Prediction Quality |
|---|---|---|---|---|---|---|---|
| Qrob_P0383020.2 | Quercus robur | 96.1 | egn | (M=1) K08775 - breast cancer 2 susceptibility protein | validated |
Powered by
