| Analysis | rpsblast_cdd | Start | 5 |
| End | 111 | Strand | + |
| Length | 107 | Note | Gaps:13 |
| Hit Coverage | 91.26 | Hit Length | 103 |
| Hit Pident | 31.91 | E Val | 5e-10 |
| Hit Description | cd00432 Ribosomal_L18_L5e Ribosomal L18/L5e: L18 (L5e) is a ribosomal protein found in the central protuberance (CP) of the large subunit. L18 binds 5S rRNA and induces a conformational change that stimulates the binding of L5 to 5S rRNA. Association of 5S rRNA with 23S rRNA depends on the binding of L18 and L5 to 5S rRNA. L18/L5e is generally described as L18 in prokaryotes and archaea and as L5e (or L5) in eukaryotes. In bacteria the CP proteins L5 L18 and L25 are required for the ribosome to incorporate 5S rRNA into the large subunit one of the last steps in ribosome assembly. In archaea both L18 and L5 bind 5S rRNA in eukaryotes only the L18 homolog (L5e) binds 5S rRNA but a homolog to L5 is also identified.. | Hit Pcons | 26.60 |
| Name | Qrob_P0252130.2 |
| Protein Identifier |
Organism . Name |
Score | Score Type | Protein Description | Alias (in v1) | Code Enzyme | Gene Prediction Quality |
|---|---|---|---|---|---|---|---|
| Qrob_P0252130.2 | Quercus robur | 98.0 | egn | (M=1) PTHR12899//PTHR12899:SF4 - 39S RIBOSOMAL PROTEIN L18, MITOCHONDRIAL // SUBFAMILY NOT NAMED (PTHR12899:SF4) | validated |
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