| Analysis | rpsblast_cdd | Start | 77 |
| End | 172 | Strand | + |
| Length | 96 | Note | Gaps:9 |
| Hit Coverage | 100.00 | Hit Length | 103 |
| Hit Pident | 31.07 | E Val | 4e-08 |
| Hit Description | pfam00804 Syntaxin Syntaxin. Syntaxins are the prototype family of SNARE proteins. They usually consist of three main regions - a C-terminal transmembrane region a central SNARE domain which is characteristic of and conserved in all syntaxins (pfam05739) and an N-terminal domain that is featured in this entry. This domain varies between syntaxin isoforms in syntaxin 1A it is found as three alpha-helices with a left-handed twist. It may fold back on the SNARE domain to allow the molecule to adopt a 'closed' configuration that prevents formation of the core fusion complex - it thus has an auto-inhibitory role. The function of syntaxins is determined by their localisation. They are involved in neuronal exocytosis ER-Golgi transport and Golgi-endosome transport for example. They also interact with other proteins as well as those involved in SNARE complexes. These include vesicle coat proteins Rab GTPases and tethering factors. | Hit Pcons | 14.56 |
| Name | Qrob_P0202080.2 |
| Protein Identifier |
Organism . Name |
Score | Score Type | Protein Description | Alias (in v1) | Code Enzyme | Gene Prediction Quality |
|---|---|---|---|---|---|---|---|
| Qrob_P0202080.2 | Quercus robur | 100.0 | egn | (M=2) K08489 - syntaxin 16 | validated |
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