Protein : Qrob_P0202080.2 Q. robur
Protein Identifier  ? Qrob_P0202080.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=2) K08489 - syntaxin 16 Gene Prediction Quality  validated
Protein length 

Sequence

Length: 302  
Kegg Orthology  K08489
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0005515 protein binding Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
GO:0016020 membrane A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
GO:0016192 vesicle-mediated transport A cellular transport process in which transported substances are moved in membrane-bounded vesicles; transported substances are enclosed in the vesicle lumen or located in the vesicle membrane. The process begins with a step that directs a substance to the forming vesicle, and includes vesicle budding and coating. Vesicles are then targeted to, and fuse with, an acceptor membrane.

25 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|cit:102612546 1 301 + 301 Gaps:27 100.00 326 77.61 0.0 syntaxin-43-like
blastp_kegg lcl|cic:CICLE_v10001826mg 1 301 + 301 Gaps:27 100.00 326 77.30 1e-176 hypothetical protein
blastp_kegg lcl|tcc:TCM_026730 1 301 + 301 Gaps:30 100.00 331 77.34 7e-173 Syntaxin of plants 43 isoform 1
blastp_kegg lcl|gmx:100796741 1 301 + 301 Gaps:31 100.00 326 75.77 1e-170 syntaxin-43-like
blastp_kegg lcl|csv:101207998 1 301 + 301 Gaps:28 100.00 329 75.68 1e-169 syntaxin-43-like
blastp_kegg lcl|pvu:PHAVU_007G199700g 1 301 + 301 Gaps:30 100.00 327 76.15 3e-169 hypothetical protein
blastp_kegg lcl|pmum:103343877 1 301 + 301 Gaps:29 100.00 324 77.16 8e-169 syntaxin-41
blastp_kegg lcl|cmo:103494462 1 301 + 301 Gaps:28 100.00 329 75.99 2e-167 syntaxin-43
blastp_kegg lcl|sot:102593977 1 301 + 301 Gaps:29 100.00 324 73.46 6e-167 syntaxin-43-like
blastp_kegg lcl|gmx:100789659 1 301 + 301 Gaps:33 100.00 326 74.54 8e-167 syntaxin-43-like
blastp_uniprot_sprot sp|Q9SUJ1|SYP43_ARATH 1 301 + 301 Gaps:34 100.00 331 70.69 5e-165 Syntaxin-43 OS Arabidopsis thaliana GN SYP43 PE 2 SV 2
blastp_uniprot_sprot sp|O65359|SYP41_ARATH 1 301 + 301 Gaps:29 100.00 322 72.05 1e-162 Syntaxin-41 OS Arabidopsis thaliana GN SYP41 PE 1 SV 1
blastp_uniprot_sprot sp|Q9SWH4|SYP42_ARATH 1 301 + 301 Gaps:34 100.00 323 60.99 1e-129 Syntaxin-42 OS Arabidopsis thaliana GN SYP42 PE 1 SV 1
blastp_uniprot_sprot sp|Q8BVI5|STX16_MOUSE 78 274 + 197 Gaps:29 69.33 326 34.51 1e-32 Syntaxin-16 OS Mus musculus GN Stx16 PE 1 SV 3
blastp_uniprot_sprot sp|O14662|STX16_HUMAN 78 274 + 197 Gaps:28 69.23 325 36.44 3e-32 Syntaxin-16 OS Homo sapiens GN STX16 PE 1 SV 3
blastp_uniprot_sprot sp|Q9P6P1|TLG2_SCHPO 1 297 + 297 Gaps:47 99.00 301 31.54 3e-26 t-SNARE affecting a late Golgi compartment protein 2 OS Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN tlg2 PE 3 SV 1
blastp_uniprot_sprot sp|Q08144|TLG2_YEAST 4 291 + 288 Gaps:75 83.88 397 24.62 4e-19 T-SNARE affecting a late Golgi compartment protein 2 OS Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN TLG2 PE 1 SV 1
blastp_uniprot_sprot sp|Q5RBW6|STX12_PONAB 227 285 + 59 none 21.38 276 37.29 7e-06 Syntaxin-12 OS Pongo abelii GN STX12 PE 2 SV 1
rpsblast_cdd gnl|CDD|34907 75 297 + 223 Gaps:29 88.34 283 24.00 3e-21 COG5325 COG5325 t-SNARE complex subunit syntaxin [Intracellular trafficking and secretion].
rpsblast_cdd gnl|CDD|128779 79 187 + 109 Gaps:7 97.44 117 27.19 1e-11 smart00503 SynN Syntaxin N-terminal domain. Three-helix domain that (in Sso1p) slows the rate of its reaction with the SNAP-25 homologue Sec9p.
rpsblast_cdd gnl|CDD|203323 211 272 + 62 Gaps:1 98.39 62 40.98 3e-09 pfam05739 SNARE SNARE domain. Most if not all vesicular membrane fusion events in eukaryotic cells are believed to be mediated by a conserved fusion machinery the SNARE [soluble N-ethylmaleimide-sensitive factor (NSF) attachment protein (SNAP) receptors] machinery. The SNARE domain is thought to act as a protein-protein interaction module in the assembly of a SNARE protein complex.
rpsblast_cdd gnl|CDD|201451 77 172 + 96 Gaps:9 100.00 103 31.07 4e-08 pfam00804 Syntaxin Syntaxin. Syntaxins are the prototype family of SNARE proteins. They usually consist of three main regions - a C-terminal transmembrane region a central SNARE domain which is characteristic of and conserved in all syntaxins (pfam05739) and an N-terminal domain that is featured in this entry. This domain varies between syntaxin isoforms in syntaxin 1A it is found as three alpha-helices with a left-handed twist. It may fold back on the SNARE domain to allow the molecule to adopt a 'closed' configuration that prevents formation of the core fusion complex - it thus has an auto-inhibitory role. The function of syntaxins is determined by their localisation. They are involved in neuronal exocytosis ER-Golgi transport and Golgi-endosome transport for example. They also interact with other proteins as well as those involved in SNARE complexes. These include vesicle coat proteins Rab GTPases and tethering factors.
rpsblast_kog gnl|CDD|36027 2 300 + 299 Gaps:52 100.00 305 42.62 1e-73 KOG0809 KOG0809 KOG0809 SNARE protein TLG2/Syntaxin 16 [Intracellular trafficking secretion and vesicular transport].
rpsblast_kog gnl|CDD|36029 68 300 + 233 Gaps:33 97.40 269 20.99 9e-14 KOG0811 KOG0811 KOG0811 SNARE protein PEP12/VAM3/Syntaxin 7/Syntaxin 17 [Intracellular trafficking secretion and vesicular transport].
rpsblast_kog gnl|CDD|36028 86 296 + 211 Gaps:40 82.49 297 25.71 3e-08 KOG0810 KOG0810 KOG0810 SNARE protein Syntaxin 1 and related proteins [Intracellular trafficking secretion and vesicular transport].

15 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 1 274 274 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Coils 124 145 22 Coil none none none
ProSiteProfiles 218 267 50 PS50192 none t-SNARE coiled-coil homology domain profile. IPR000727
SMART 199 267 69 SM00397 none Helical region found in SNAREs IPR000727
Phobius 275 296 22 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
PANTHER 1 300 300 PTHR19957 none none none
Pfam 219 272 54 PF05739 none SNARE domain IPR000727
Phobius 297 301 5 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Gene3D 218 297 80 G3DSA:1.20.5.110 none none none
SMART 72 187 116 SM00503 "Reactome:REACT_11184" Syntaxin N-terminal domain IPR006011
SUPERFAMILY 77 260 184 SSF47661 none none IPR010989
Pfam 79 175 97 PF00804 "Reactome:REACT_11184" Syntaxin IPR006011
Coils 85 106 22 Coil none none none
PANTHER 1 300 300 PTHR19957:SF83 none none none
Gene3D 77 193 117 G3DSA:1.20.58.70 none none none

1 Localization

Analysis Start End Length
TMHMM 274 296 22

0 Qtllist

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 30   Mitochondrion 4 0.027 0.681 NON-PLANT 30