| Analysis | rpsblast_cdd | Start | 47 |
| End | 189 | Strand | + |
| Length | 143 | Note | Gaps:16 |
| Hit Coverage | 100.00 | Hit Length | 151 |
| Hit Pident | 27.81 | E Val | 1e-10 |
| Hit Description | cd06167 LabA_like LabA_like proteins. A well conserved group of domains found in all three kingdoms of life with no defined function. LabA a member from Synechococcus elongatus PCC 7942 has been shown to play a role in cyanobacterial circadian timing. It is required for negative feedback regulation of the autokinase/autophosphatase KaiC a central component of the circadian clock system. In particular LabA seems necessary for KaiC-dependent repression of gene expression. Another member is the N-terminal domain of limkain b1 a human autoantigen associated with cytoplasmic vesicles. Curiously a gene labeled NicB from Pseudomonas putida S16 which is described as a putative NADH-dependent hydroxylase involved in the microbial degradation of nicotine also falls in the LabA_like family. LabA_like domains exhibit some similarity to the NYN domain a distant relative of the PIN-domain nucleases. | Hit Pcons | 15.23 |
| Name | Qrob_P0170580.2 |
| Protein Identifier |
Organism . Name |
Score | Score Type | Protein Description | Alias (in v1) | Code Enzyme | Gene Prediction Quality |
|---|---|---|---|---|---|---|---|
| Qrob_P0170580.2 | Quercus robur | 100.0 | egn | (M=2) PTHR14379 - LIMKAIN B (LKAP) | validated |
Powered by
