Blast Analysis : gnl|CDD|29225

Analysis  rpsblast_cdd Start  107
End  211 Strand  +
Length  105 Note  Gaps:6
Hit Coverage  58.29 Hit Length  187
Hit Pident  51.38 E Val  1e-30
Hit Description  cd01452 VWA_26S_proteasome_subunit 26S proteasome plays a major role in eukaryotic protein breakdown especially for ubiquitin-tagged proteins. It is an ATP-dependent protease responsible for the bulk of non-lysosomal proteolysis in eukaryotes often using covalent modification of proteins by ubiquitylation. It consists of a 20S proteolytic core particle (CP) and a 19S regulatory particle (RP). The CP is an ATP independent peptidase consisting of hydrolyzing activities. One or both ends of CP carry the RP that confers both ubiquitin and ATP dependence to the 26S proteosome. The RP's proposed functions include recognition of substrates and translocation of these to CP for proteolysis. The RP can dissociate into a stable lid and base subcomplexes. The base is composed of three non-ATPase subunits (Rpn 1 2 and 10). A single residue in the vWA domain of Rpn10 has been implicated to be responsible for stabilizing the lid-base association.. Hit Pcons  19.27
Name  Qrob_P0089550.2
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1 Protein

Protein Identifier
Organism . Name 		Score Score Type Protein Description Alias (in v1) Code Enzyme Gene Prediction Quality
Qrob_P0089550.2 Quercus robur 51.1 egn (M=1) KOG0652//KOG0726//KOG0727//KOG0728//KOG0729//KOG1356//KOG2884//KOG3043 - 26S proteasome regulatory complex ATPase RPT5 [Posttranslational modification protein turnover chaperones]. // 26S proteasome regulatory complex ATPase RPT2 [Posttranslational modification protein turnover chaperones]. // 26S proteasome regulatory complex ATPase RPT3 [Posttranslational modification protein turnover chaperones]. // 26S proteasome regulatory complex ATPase RPT6 [Posttranslational modification protein turnover chaperones]. // 26S proteasome regulatory complex ATPase RPT1 [Posttranslational modification protein turnover chaperones]. // Putative transcription factor 5qNCA contains JmjC domain [Transcription]. // 26S proteasome regulatory complex subunit RPN10/PSMD4 [Posttranslational modification protein turnover chaperones]. // Predicted hydrolase related to dienelactone hydrolase [General function prediction only].     validated