| Analysis | rpsblast_cdd | Start | 376 |
| End | 514 | Strand | + |
| Length | 139 | Note | Gaps:8 |
| Hit Coverage | 100.00 | Hit Length | 135 |
| Hit Pident | 55.56 | E Val | 2e-56 |
| Hit Description | pfam04146 YTH YT521-B-like domain. A protein of the YTH family has been shown to selectively remove transcripts of meiosis-specific genes expressed in mitotic cells. It has been speculated that in higher eukaryotic YTH-family members may be involved in similar mechanisms to suppress gene regulation during gametogenesis or general silencing. The rat protein YT521-B is a tyrosine-phosphorylated nuclear protein that interacts with the nuclear transcriptosomal component scaffold attachment factor B and the 68-kDa Src substrate associated during mitosis Sam68. In vivo splicing assays demonstrated that YT521-B modulates alternative splice site selection in a concentration-dependent manner. The YTH domain has been identified as part of the PUA superfamily. | Hit Pcons | 16.30 |
| Name | Qrob_P0080510.2 |
| Protein Identifier |
Organism . Name |
Score | Score Type | Protein Description | Alias (in v1) | Code Enzyme | Gene Prediction Quality |
|---|---|---|---|---|---|---|---|
| Qrob_P0080510.2 | Quercus robur | 100.0 | egn | (M=2) PTHR12357:SF24 - EVOLUTIONARILY CONSERVED C-TERMINAL REGION 10 (PTHR12357:SF24) | validated |
Powered by
