| Analysis | rpsblast_cdd | Start | 9 |
| End | 74 | Strand | + |
| Length | 66 | Note | Gaps:48 |
| Hit Coverage | 48.18 | Hit Length | 220 |
| Hit Pident | 31.13 | E Val | 5e-10 |
| Hit Description | cd03263 ABC_subfamily_A The ABCA subfamily mediates the transport of a variety of lipid compounds. Mutations of members of ABCA subfamily are associated with human genetic diseases such as familial high-density lipoprotein (HDL) deficiency neonatal surfactant deficiency degenerative retinopathies and congenital keratinization disorders. The ABCA1 protein is involved in disorders of cholesterol transport and high-density lipoprotein (HDL) biosynthesis. The ABCA4 (ABCR) protein transports vitamin A derivatives in the outer segments of photoreceptor cells and therefore performs a crucial step in the visual cycle. The ABCA genes are not present in yeast. However evolutionary studies of ABCA genes indicate that they arose as transporters that subsequently duplicated and that certain sets of ABCA genes were lost in different eukaryotic lineages.. | Hit Pcons | 5.66 |
| Name | Qrob_P0069090.2 |
| Protein Identifier |
Organism . Name |
Score | Score Type | Protein Description | Alias (in v1) | Code Enzyme | Gene Prediction Quality |
|---|---|---|---|---|---|---|---|
| Qrob_P0069090.2 | Quercus robur | 14.1 | egn | (M=1) PTHR19229//PTHR19229:SF105 - ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A (ABCA) // SUBFAMILY NOT NAMED | EC:3.6.3.25 | validated |
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