Blast Analysis : gnl|CDD|129705

Analysis  rpsblast_cdd Start  108
End  734 Strand  +
Length  627 Note  Gaps:57
Hit Coverage  64.11 Hit Length  1042
Hit Pident  14.82 E Val  2e-10
Hit Description  TIGR00618 sbcc exonuclease SbcC. All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999 Ph.D. Thesis Stanford University). Hit Pcons  18.56
Name  Qrob_P0039830.2
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1 Protein

Protein Identifier
Organism . Name 		Score Score Type Protein Description Alias (in v1) Code Enzyme Gene Prediction Quality
Qrob_P0039830.2 Quercus robur 100.0 egn (M=1) KOG0018//KOG0161//KOG0243//KOG0612//KOG0933//KOG0962//KOG0964//KOG0976//KOG0996//KOG1029 - Structural maintenance of chromosome protein 1 (sister chromatid cohesion complex Cohesin subunit SMC1) [Cell cycle control cell division chromosome partitioning]. // Myosin class II heavy chain [Cytoskeleton]. // Kinesin-like protein [Cytoskeleton]. // Rho-associated coiled-coil containing protein kinase [Signal transduction mechanisms]. // Structural maintenance of chromosome protein 2 (chromosome condensation complex Condensin subunit E) [Chromatin structure and dynamics Cell cycle control cell division chromosome partitioning]. // DNA repair protein RAD50 ABC-type ATPase/SMC superfamily [Replication recombination and repair]. // Structural maintenance of chromosome protein 3 (sister chromatid cohesion complex Cohesin subunit SMC3) [Cell cycle control cell division chromosome partitioning]. // Rho/Rac1-interacting serine/threonine kinase Citron [Signal transduction mechanisms]. // Structural maintenance of chromosome protein 4 (chromosome condensation complex Condensin subunit C) [Chromatin structure and dynamics Cell cycle control cell division chromosome partitioning]. // Endocytic adaptor protein intersectin [Signal transduction mechanisms Intracellular trafficking secretion and vesicular transport].     validated