Blast Analysis : gnl|CDD|202246

Analysis  rpsblast_cdd Start  56
End  767 Strand  +
Length  712 Note  Gaps:38
Hit Coverage  74.61 Hit Length  1162
Hit Pident  33.56 E Val  7e-11
Hit Description  pfam02463 SMC_N RecF/RecN/SMC N terminal domain. This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination. Hit Pcons  29.18
Name  Qrob_P0039830.2
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1 Protein

Protein Identifier
Organism . Name 		Score Score Type Protein Description Alias (in v1) Code Enzyme Gene Prediction Quality
Qrob_P0039830.2 Quercus robur 100.0 egn (M=1) KOG0018//KOG0161//KOG0243//KOG0612//KOG0933//KOG0962//KOG0964//KOG0976//KOG0996//KOG1029 - Structural maintenance of chromosome protein 1 (sister chromatid cohesion complex Cohesin subunit SMC1) [Cell cycle control cell division chromosome partitioning]. // Myosin class II heavy chain [Cytoskeleton]. // Kinesin-like protein [Cytoskeleton]. // Rho-associated coiled-coil containing protein kinase [Signal transduction mechanisms]. // Structural maintenance of chromosome protein 2 (chromosome condensation complex Condensin subunit E) [Chromatin structure and dynamics Cell cycle control cell division chromosome partitioning]. // DNA repair protein RAD50 ABC-type ATPase/SMC superfamily [Replication recombination and repair]. // Structural maintenance of chromosome protein 3 (sister chromatid cohesion complex Cohesin subunit SMC3) [Cell cycle control cell division chromosome partitioning]. // Rho/Rac1-interacting serine/threonine kinase Citron [Signal transduction mechanisms]. // Structural maintenance of chromosome protein 4 (chromosome condensation complex Condensin subunit C) [Chromatin structure and dynamics Cell cycle control cell division chromosome partitioning]. // Endocytic adaptor protein intersectin [Signal transduction mechanisms Intracellular trafficking secretion and vesicular transport].     validated