Blast Analysis : gnl|CDD|162739

Analysis  rpsblast_cdd Start  102
End  760 Strand  +
Length  659 Note  Gaps:196
Hit Coverage  74.98 Hit Length  1179
Hit Pident  38.80 E Val  1e-13
Hit Description  TIGR02168 SMC_prok_B chromosome segregation protein SMC common bacterial type. SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria archaea and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. Hit Pcons  20.81
Name  Qrob_P0039830.2
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1 Protein

Protein Identifier
Organism . Name 		Score Score Type Protein Description Alias (in v1) Code Enzyme Gene Prediction Quality
Qrob_P0039830.2 Quercus robur 100.0 egn (M=1) KOG0018//KOG0161//KOG0243//KOG0612//KOG0933//KOG0962//KOG0964//KOG0976//KOG0996//KOG1029 - Structural maintenance of chromosome protein 1 (sister chromatid cohesion complex Cohesin subunit SMC1) [Cell cycle control cell division chromosome partitioning]. // Myosin class II heavy chain [Cytoskeleton]. // Kinesin-like protein [Cytoskeleton]. // Rho-associated coiled-coil containing protein kinase [Signal transduction mechanisms]. // Structural maintenance of chromosome protein 2 (chromosome condensation complex Condensin subunit E) [Chromatin structure and dynamics Cell cycle control cell division chromosome partitioning]. // DNA repair protein RAD50 ABC-type ATPase/SMC superfamily [Replication recombination and repair]. // Structural maintenance of chromosome protein 3 (sister chromatid cohesion complex Cohesin subunit SMC3) [Cell cycle control cell division chromosome partitioning]. // Rho/Rac1-interacting serine/threonine kinase Citron [Signal transduction mechanisms]. // Structural maintenance of chromosome protein 4 (chromosome condensation complex Condensin subunit C) [Chromatin structure and dynamics Cell cycle control cell division chromosome partitioning]. // Endocytic adaptor protein intersectin [Signal transduction mechanisms Intracellular trafficking secretion and vesicular transport].     validated