| Analysis | rpsblast_cdd | Start | 123 |
| End | 210 | Strand | + |
| Length | 88 | Note | Gaps:3 |
| Hit Coverage | 48.88 | Hit Length | 178 |
| Hit Pident | 33.33 | E Val | 1e-08 |
| Hit Description | cd06142 RNaseD_exo DEDDy 3'-5' exonuclease domain of Ribonuclease D and similar proteins. Ribonuclease (RNase) D is a bacterial enzyme involved in the maturation of small stable RNAs and the 3' maturation of tRNA. It contains a DEDDy-type DnaQ-like 3'-5' exonuclease domain possessing three conserved sequence motifs termed ExoI ExoII and ExoIII with a specific YX(3)D pattern at ExoIII. These motifs are clustered around the active site and contain four conserved acidic residues that serve as ligands for the two metal ions required for catalysis. In vivo RNase D only becomes essential upon removal of other ribonucleases. Eukaryotic RNase D homologs include yeast Rrp6p human PM/Scl-100 and the Drosophila melanogaster egalitarian protein. | Hit Pcons | 14.94 |
| Name | Qrob_P0038400.2 |
| Protein Identifier |
Organism . Name |
Score | Score Type | Protein Description | Alias (in v1) | Code Enzyme | Gene Prediction Quality |
|---|---|---|---|---|---|---|---|
| Qrob_P0038400.2 | Quercus robur | 0.0 | egn | (M=2) K18740 - exonuclease 3'-5' domain-containing protein 1 | validated |
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