Blast Analysis : gnl|CDD|175973

Analysis  rpsblast_cdd Start  59
End  344 Strand  +
Length  286 Note  Gaps:22
Hit Coverage  95.10 Hit Length  102
Hit Pident  42.27 E Val  2e-09
Hit Description  cd00030 C2 C2 domain. The C2 domain was first identified in PKC. C2 domains fold into an 8-standed beta-sandwich that can adopt 2 structural arrangements: Type I and Type II distinguished by a circular permutation involving their N- and C-terminal beta strands. Many C2 domains are Ca2+-dependent membrane-targeting modules that bind a wide variety of substances including bind phospholipids inositol polyphosphates and intracellular proteins. Most C2 domain proteins are either signal transduction enzymes that contain a single C2 domain such as protein kinase C or membrane trafficking proteins which contain at least two C2 domains such as synaptotagmin 1. However there are a few exceptions to this including RIM isoforms and some splice variants of piccolo/aczonin and intersectin which only have a single C2 domain. C2 domains with a calcium binding region have negatively charged residues primarily aspartates that serve as ligands for calcium ions. Hit Pcons  17.53
Name  Qrob_P0027210.2

1 Protein

Protein Identifier
Organism . Name
Score Score Type Protein Description Alias (in v1) Code Enzyme Gene Prediction Quality
Qrob_P0027210.2 Quercus robur 93.0 egn (M=8) PTHR10857//PTHR10857:SF24 - COPINE // SUBFAMILY NOT NAMED     validated