Blast Analysis : gnl|CDD|201982

Analysis  rpsblast_cdd Start  313
End  575 Strand  +
Length  263 Note  Gaps:40
Hit Coverage  99.57 Hit Length  230
Hit Pident  35.37 E Val  2e-65
Hit Description  pfam01803 LIM_bind LIM-domain binding protein. The LIM-domain binding protein binds to the LIM domain pfam00412 of LIM homeodomain proteins which are transcriptional regulators of development. Nuclear LIM interactor (NLI) / LIM domain-binding protein 1 (LDB1) is located in the nuclei of neuronal cells during development it is co-expressed with Isl1 in early motor neuron differentiation and has a suggested role in the Isl1 dependent development of motor neurons. It is suggested that these proteins act synergistically to enhance transcriptional efficiency by acting as co-factors for LIM homeodomain and Otx class transcription factors both of which have essential roles in development. The Drosophila protein Chip is required for segmentation and activity of a remote wing margin enhancer. Chip is a ubiquitous chromosomal factor required for normal expression of diverse genes at many stages of development. It is suggested that Chip cooperates with different LIM domain proteins and other factors to structurally support remote enhancer-promoter interactions. Hit Pcons  16.59
Name  Qrob_P0014320.2
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1 Protein

Protein Identifier
Organism . Name 		Score Score Type Protein Description Alias (in v1) Code Enzyme Gene Prediction Quality
Qrob_P0014320.2 Quercus robur 63.0 egn (M=1) KOG1883//KOG3561//KOG3598 - Cofactor required for Sp1 transcriptional activation subunit 3 [Transcription]. // Aryl-hydrocarbon receptor nuclear translocator [Transcription]. // Thyroid hormone receptor-associated protein complex subunit TRAP230 [Transcription].     validated