Protein : Qrob_P0768180.2 Q. robur
Protein Identifier  ? Qrob_P0768180.2 Organism . Name  Quercus robur
Score  86.0 Score Type  egn
Protein Description  (M=1) K02358 - elongation factor EF-Tu [EC:3.6.5.3] Code Enzyme  EC:3.6.5.3
Gene Prediction Quality  validated Protein length 

Sequence

Length: 397  
Kegg Orthology  K02358
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0 Synonyms

5 GO Terms

Identifier Name Description
GO:0005622 intracellular The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
GO:0005525 GTP binding Interacting selectively and non-covalently with GTP, guanosine triphosphate.
GO:0003746 translation elongation factor activity Functions in chain elongation during polypeptide synthesis at the ribosome.
GO:0006414 translational elongation The successive addition of amino acid residues to a nascent polypeptide chain during protein biosynthesis.
GO:0003924 GTPase activity Catalysis of the reaction: GTP + H2O = GDP + phosphate.

50 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|mdm:103432454 1 395 + 395 none 87.78 450 90.63 0.0 elongation factor Tu mitochondrial
blastp_kegg lcl|pxb:103947547 1 395 + 395 none 87.78 450 90.63 0.0 elongation factor Tu mitochondrial
blastp_kegg lcl|mdm:103449073 1 395 + 395 none 87.78 450 90.38 0.0 elongation factor Tu mitochondrial-like
blastp_kegg lcl|csv:101217959 1 395 + 395 none 87.78 450 90.63 0.0 elongation factor Tu mitochondrial-like
blastp_kegg lcl|cmo:103492697 1 395 + 395 none 87.78 450 90.13 0.0 elongation factor Tu mitochondrial
blastp_kegg lcl|pop:POPTR_0014s13420g 1 395 + 395 none 87.78 450 90.13 0.0 POPTRDRAFT_664547 Elongation factor Tu family protein
blastp_kegg lcl|rcu:RCOM_0648170 1 395 + 395 none 87.97 449 93.42 0.0 elongation factor tu putative (EC:2.7.7.4)
blastp_kegg lcl|pop:POPTR_0002s22460g 1 395 + 395 Gaps:1 88.39 448 89.14 0.0 POPTRDRAFT_552665 Elongation factor Tu family protein
blastp_kegg lcl|obr:102708048 1 395 + 395 Gaps:1 97.52 404 89.59 0.0 elongation factor Tu mitochondrial-like
blastp_kegg lcl|gmx:102667962 1 396 + 396 none 88.00 450 91.92 0.0 elongation factor Tu mitochondrial-like
blastp_pdb 1eft_A 4 395 + 392 Gaps:14 98.77 405 67.50 0.0 mol:protein length:405 ELONGATION FACTOR TU
blastp_pdb 2c78_A 4 395 + 392 Gaps:14 98.77 405 67.25 0.0 mol:protein length:405 ELONGATION FACTOR TU-A
blastp_pdb 4abr_Z 4 395 + 392 Gaps:14 98.77 405 67.00 0.0 mol:protein length:405 ELONGATION FACTOR TU
blastp_pdb 2y0w_Z 4 395 + 392 Gaps:14 98.77 405 67.25 0.0 mol:protein length:405 ELONGATION FACTOR TU
blastp_pdb 2y0u_Z 4 395 + 392 Gaps:14 98.77 405 67.25 0.0 mol:protein length:405 ELONGATION FACTOR TU
blastp_pdb 2c77_A 4 395 + 392 Gaps:14 98.77 405 67.25 0.0 mol:protein length:405 ELONGATION FACTOR TU-B
blastp_pdb 1zc8_Y 4 395 + 392 Gaps:14 98.77 405 67.00 0.0 mol:protein length:405 Elongation factor Tu
blastp_pdb 1tui_C 4 395 + 392 Gaps:14 98.77 405 67.00 0.0 mol:protein length:405 ELONGATION FACTOR TU
blastp_pdb 1tui_B 4 395 + 392 Gaps:14 98.77 405 67.00 0.0 mol:protein length:405 ELONGATION FACTOR TU
blastp_pdb 1tui_A 4 395 + 392 Gaps:14 98.77 405 67.00 0.0 mol:protein length:405 ELONGATION FACTOR TU
blastp_uniprot_sprot sp|Q9ZT91|EFTM_ARATH 1 395 + 395 Gaps:1 87.22 454 89.65 0.0 Elongation factor Tu mitochondrial OS Arabidopsis thaliana GN TUFA PE 1 SV 1
blastp_uniprot_sprot sp|Q0BUQ2|EFTU_GRABC 2 394 + 393 Gaps:2 98.74 396 72.63 0.0 Elongation factor Tu OS Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) GN tuf PE 3 SV 1
blastp_uniprot_sprot sp|Q2IXR2|EFTU_RHOP2 2 395 + 394 Gaps:2 98.99 396 71.68 0.0 Elongation factor Tu OS Rhodopseudomonas palustris (strain HaA2) GN tuf1 PE 3 SV 1
blastp_uniprot_sprot sp|A5V604|EFTU_SPHWW 2 394 + 393 Gaps:2 98.74 396 70.84 0.0 Elongation factor Tu OS Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) GN tuf PE 3 SV 1
blastp_uniprot_sprot sp|Q134S7|EFTU1_RHOPS 2 395 + 394 Gaps:2 98.99 396 71.43 0.0 Elongation factor Tu 1 OS Rhodopseudomonas palustris (strain BisB5) GN tuf1 PE 3 SV 1
blastp_uniprot_sprot sp|O21245|EFTU_RECAM 4 395 + 392 Gaps:4 98.48 394 71.91 0.0 Elongation factor Tu mitochondrial OS Reclinomonas americana GN TUFA PE 3 SV 1
blastp_uniprot_sprot sp|Q134R0|EFTU2_RHOPS 2 395 + 394 Gaps:2 98.99 396 71.17 0.0 Elongation factor Tu 2 OS Rhodopseudomonas palustris (strain BisB5) GN tuf2 PE 3 SV 1
blastp_uniprot_sprot sp|Q07KJ2|EFTU_RHOP5 2 395 + 394 Gaps:2 98.99 396 71.43 0.0 Elongation factor Tu OS Rhodopseudomonas palustris (strain BisA53) GN tuf1 PE 3 SV 1
blastp_uniprot_sprot sp|A7HBL7|EFTU_ANADF 4 395 + 392 Gaps:2 98.48 396 71.79 0.0 Elongation factor Tu OS Anaeromyxobacter sp. (strain Fw109-5) GN tuf1 PE 3 SV 1
blastp_uniprot_sprot sp|Q3SSW8|EFTU_NITWN 2 395 + 394 Gaps:2 98.99 396 70.66 0.0 Elongation factor Tu OS Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) GN tuf PE 3 SV 1

21 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PANTHER 3 395 393 PTHR23115 none none none
TIGRFAM 2 395 394 TIGR00485 none EF-Tu: translation elongation factor Tu IPR004541
SUPERFAMILY 205 300 96 SSF50447 none none IPR009000
Gene3D 212 299 88 G3DSA:2.40.30.10 none none none
PANTHER 3 395 393 PTHR23115:SF112 none none none
TIGRFAM 11 148 138 TIGR00231 none small_GTP: small GTP-binding protein domain IPR005225
SUPERFAMILY 6 226 221 SSF52540 none none IPR027417
SUPERFAMILY 305 396 92 SSF50465 none none IPR009001
ProSitePatterns 49 64 16 PS00301 none Translational (tr)-type guanine nucleotide-binding (G) domain signature. IPR031157
Hamap 1 396 396 MF_00118_B none Elongation factor Tu [tuf]. IPR004541
Pfam 301 395 95 PF03143 none Elongation factor Tu C-terminal domain IPR004160
ProSiteProfiles 8 204 197 PS51722 none Translational (tr)-type guanine nucleotide-binding (G) domain profile. IPR000795
Gene3D 303 395 93 G3DSA:2.40.30.10 none none none
Pfam 8 200 193 PF00009 none Elongation factor Tu GTP binding domain none
PRINTS 92 103 12 PR00315 none GTP-binding elongation factor signature IPR000795
PRINTS 56 64 9 PR00315 none GTP-binding elongation factor signature IPR000795
PRINTS 76 86 11 PR00315 none GTP-binding elongation factor signature IPR000795
PRINTS 12 25 14 PR00315 none GTP-binding elongation factor signature IPR000795
PRINTS 129 138 10 PR00315 none GTP-binding elongation factor signature IPR000795
Gene3D 4 211 208 G3DSA:3.40.50.300 none none IPR027417
Pfam 225 296 72 PF03144 none Elongation factor Tu domain 2 IPR004161

0 Localization

17 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nSecLBD_3P Qrob_Chr08 8 s_1BN2OD_551 s_1B5AYF_599 17,17 0 43,51 lod 1,9229 4,4
Bourran2_2014_nLBD*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,25 0 35,55 lod 2,5951 6
Bourran2_2014_nP*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,19 0 31,97 lod 2,8472 6
Bourran2_2002_QTL11_peak_Bud_burst_A4 Qrob_Chr06 6 s_1C41PA_791 s_1AM1AV_1141 19,17 0 34,57 lod 2,3 2,9
Bourran2_2014_aSeqBC_3P Qrob_Chr06 6 v_506_189 v_686_77 30,72 13,58 43,48 lod 2,2746 6,3
Bourran2_2014_aSeqBC*_A4 Qrob_Chr06 6 s_2F5MK3_712 v_444_355 27,13 14,86 39,46 lod 3,7847 9,8
Bourran2_2014_nEpis*_3P Qrob_Chr08 8 s_1DA4QW_688 s_1DNI7D_820 17,96 0 37,75 lod 2,9745 7,5
Bourran2_2014_nEpis*_A4 Qrob_Chr07 7 v_12400_446 s_1BPEBU_1211 6,93 0 15,13 lod 4,7411 11
Bourran2_2014_nFork*_3P Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 34,28 7,43 41,48 lod 2,4044 5,5
Bourran2_2014_nLBD_A4 Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 37,41 9,8 50,1 lod 1,9524 4,1
Bourran2_2014_nPriBD_A4 Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 34,51 3,36 51,86 lod 1,6747 3,9
Bourran2_2014_nPriLBD*_3P Qrob_Chr11 11 v_12066_307 s_1B15GJ_447 3,37 0,57 16,17 lod 3,4299 6,9
Bourran2_2014_nSecLBD_A4 Qrob_Chr07 7 v_8327_222 s_1A4WGY_363 16,04 0 44,69 lod 2,6373 6,5
Bourran2_2014_vEpiBC_A4 Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 37,55 14,41 50,01 lod 1,7882 4,8
Champenoux_2015_nEpis_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,53 25,47 27,72 lod 4.4 8.9
Champenoux_2015_nP_3P Qrob_Chr06 6 s_1A386O_228 s_1AYZFS_603 27,03 26,47 27,34 lod 2.8 7.2
Bourran2_2014_nPriBD*_3P Qrob_Chr06 6 s_1B6WLL_980 v_10064_133 11,49 0 31,52 lod 4,1208 9,1

0 Targeting