Protein : Qrob_P0754510.2 Q. robur
Protein Identifier  ? Qrob_P0754510.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=5) 5.1.3.3 - Aldose 1-epimerase. Code Enzyme  EC:5.1.3.3
Gene Prediction Quality  validated Protein length 

Sequence

Length: 358  
Kegg Orthology  K01785
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0 Synonyms

5 GO Terms

Identifier Name Description
GO:0003824 catalytic activity Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
GO:0005975 carbohydrate metabolic process The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule.
GO:0030246 carbohydrate binding Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates.
GO:0016853 isomerase activity Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5.
GO:0019318 hexose metabolic process The chemical reactions and pathways involving a hexose, any monosaccharide with a chain of six carbon atoms in the molecule.

41 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pmum:103329983 1 356 + 356 Gaps:4 98.36 366 73.06 0.0 aldose 1-epimerase-like
blastp_kegg lcl|pper:PRUPE_ppa024124mg 1 356 + 356 Gaps:4 98.36 366 73.06 0.0 hypothetical protein
blastp_kegg lcl|mdm:103404424 1 355 + 355 Gaps:4 97.82 367 71.31 0.0 aldose 1-epimerase
blastp_kegg lcl|pxb:103938744 1 355 + 355 Gaps:4 97.29 369 71.87 0.0 aldose 1-epimerase
blastp_kegg lcl|fve:101296017 1 356 + 356 Gaps:7 99.45 365 70.80 0.0 aldose 1-epimerase-like
blastp_kegg lcl|csv:101226474 1 356 + 356 Gaps:3 99.72 360 69.36 1e-179 aldose 1-epimerase-like
blastp_kegg lcl|csv:101203750 1 356 + 356 Gaps:3 99.72 360 69.36 1e-179 aldose 1-epimerase-like
blastp_kegg lcl|cmo:103487014 1 356 + 356 Gaps:3 93.73 383 69.08 3e-178 aldose 1-epimerase
blastp_kegg lcl|mtr:MTR_7g009930 1 356 + 356 Gaps:3 99.17 362 68.80 4e-177 Aldose 1-epimerase
blastp_kegg lcl|vvi:100245569 1 355 + 355 Gaps:1 99.16 359 68.82 3e-175 aldose 1-epimerase-like
blastp_pdb 1so0_D 11 355 + 345 Gaps:16 97.97 344 40.65 2e-71 mol:protein length:344 aldose 1-epimerase
blastp_pdb 1so0_C 11 355 + 345 Gaps:16 97.97 344 40.65 2e-71 mol:protein length:344 aldose 1-epimerase
blastp_pdb 1so0_B 11 355 + 345 Gaps:16 97.97 344 40.65 2e-71 mol:protein length:344 aldose 1-epimerase
blastp_pdb 1so0_A 11 355 + 345 Gaps:16 97.97 344 40.65 2e-71 mol:protein length:344 aldose 1-epimerase
blastp_pdb 1snz_B 11 355 + 345 Gaps:16 97.97 344 40.65 2e-71 mol:protein length:344 aldose 1-epimerase
blastp_pdb 1snz_A 11 355 + 345 Gaps:16 97.97 344 40.65 2e-71 mol:protein length:344 aldose 1-epimerase
blastp_pdb 1lur_B 29 355 + 327 Gaps:23 95.58 339 33.95 3e-49 mol:protein length:339 aldose 1-epimerase
blastp_pdb 1lur_A 29 355 + 327 Gaps:23 95.58 339 33.95 3e-49 mol:protein length:339 aldose 1-epimerase
blastp_pdb 1mn0_B 35 356 + 322 Gaps:21 91.93 347 29.47 6e-26 mol:protein length:347 Aldose 1-epimerase
blastp_pdb 1mn0_A 35 356 + 322 Gaps:21 91.93 347 29.47 6e-26 mol:protein length:347 Aldose 1-epimerase
blastp_uniprot_sprot sp|Q5EA79|GALM_BOVIN 31 355 + 325 Gaps:14 93.27 342 44.20 1e-79 Aldose 1-epimerase OS Bos taurus GN GALM PE 2 SV 1
blastp_uniprot_sprot sp|P05149|GALM_ACICA 26 354 + 329 Gaps:16 90.03 381 41.11 3e-75 Aldose 1-epimerase OS Acinetobacter calcoaceticus GN mro PE 1 SV 1
blastp_uniprot_sprot sp|Q9GKX6|GALM_PIG 31 355 + 325 Gaps:12 93.27 342 42.01 6e-75 Aldose 1-epimerase OS Sus scrofa GN GALM PE 2 SV 1
blastp_uniprot_sprot sp|Q66HG4|GALM_RAT 31 355 + 325 Gaps:12 93.27 342 41.38 5e-73 Aldose 1-epimerase OS Rattus norvegicus GN Galm PE 1 SV 1
blastp_uniprot_sprot sp|Q8K157|GALM_MOUSE 31 355 + 325 Gaps:12 93.27 342 41.69 9e-72 Aldose 1-epimerase OS Mus musculus GN Galm PE 2 SV 1
blastp_uniprot_sprot sp|Q96C23|GALM_HUMAN 31 355 + 325 Gaps:14 93.27 342 41.38 6e-71 Aldose 1-epimerase OS Homo sapiens GN GALM PE 1 SV 1
blastp_uniprot_sprot sp|Q5R8U1|GALM_PONAB 31 355 + 325 Gaps:14 93.27 342 41.38 8e-71 Aldose 1-epimerase OS Pongo abelii GN GALM PE 2 SV 1
blastp_uniprot_sprot sp|P0A9C4|GALM_SHIFL 40 354 + 315 Gaps:19 91.33 346 36.39 7e-54 Aldose 1-epimerase OS Shigella flexneri GN galM PE 3 SV 1
blastp_uniprot_sprot sp|P0A9C3|GALM_ECOLI 40 354 + 315 Gaps:19 91.33 346 36.39 7e-54 Aldose 1-epimerase OS Escherichia coli (strain K12) GN galM PE 1 SV 1
blastp_uniprot_sprot sp|P21955|GALM_STRTR 46 354 + 309 Gaps:14 88.79 348 34.63 2e-46 Aldose 1-epimerase OS Streptococcus thermophilus GN galM PE 3 SV 1

11 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 22 357 336 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
SUPERFAMILY 24 355 332 SSF74650 none none IPR011013
Pfam 31 352 322 PF01263 none Aldose 1-epimerase IPR008183
PANTHER 11 355 345 PTHR10091:SF3 none none none
Phobius 1 3 3 SIGNAL_PEPTIDE_N_REGION none N-terminal region of a signal peptide. none
Phobius 4 16 13 SIGNAL_PEPTIDE_H_REGION none Hydrophobic region of a signal peptide. none
Gene3D 22 356 335 G3DSA:2.70.98.10 none none IPR014718
Phobius 1 21 21 SIGNAL_PEPTIDE none Signal peptide region none
PANTHER 11 355 345 PTHR10091 none none none
Phobius 17 21 5 SIGNAL_PEPTIDE_C_REGION none C-terminal region of a signal peptide. none
PIRSF 16 357 342 PIRSF005096 "KEGG:00010+5.1.3.3","KEGG:00052+5.1.3.3","MetaCyc:PWY-2723","MetaCyc:PWY-6317","MetaCyc:PWY-6737","UniPathway:UPA00242" none IPR015443

3 Localization

Analysis Start End Length
SignalP_GRAM_NEGATIVE 1 21 20
SignalP_EUK 1 21 20
SignalP_GRAM_POSITIVE 1 24 23

17 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2003_QTL2_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 87 lod 3,3 8,7
Bourran2_2004_QTL9_peak_Bud_burst_3P Qrob_Chr02 2 s_1C34E9_788 v_12238_322 50 25 75 lod 4,4 10,1
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL2_d13Cf Qrob_Chr02 2 s_1AQA4Z_1644 s_1AK5QX_947 53.67 14,01 79,68 lod 5.6594 0.03
Bourran1_2004_QTL2_peak_Bud_burst_3P Qrob_Chr02 2 s_1AW12F_382 s_1A77MR_223 42 6 64 lod 3,6 9,6
Bourran2_2002_QTL7_peak_Bud_burst_3P Qrob_Chr02 2 s_1ANG6_1446 v_11270_161 40 29 52 lod 8,1 16
Bourran2_2002_QTL9_peak_Bud_burst_A4 Qrob_Chr02 2 s_1BFNDA_375 s_1A3VA1_2139 32,5 17 62 lod 3,1 4,2
Bourran2_2003_QTL8_peak_Bud_burst_3P Qrob_Chr02 2 s_1ANG6_1446 v_11270_161 40 0 72 lod 4,4 9,9
Bourran2_2014_nP_A4 Qrob_Chr11 11 s_1B58GB_1413 s_1A5BYY_1671 11,15 0 42,38 lod 1,8913 4,5
Bourran2_2015_nP_A4 Qrob_Chr02 2 s_1A0FUE_1868 s_1A1UAI_500 20,64 20,47 21,36 lod 5.8 10.9
Bourran2_2015_nPriLBD_A4 Qrob_Chr02 2 s_1CP5DI_1183 s_1A63ZX_1277 24,87 24,63 26,18 lod 3.8 7
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL6_d13Cf Qrob_Chr02 2 s_1AEP21_172 v_6048_204 46.33 22,5 65,23 lod 4.972 0.03
Bourran2_2015_nEpis_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 34,94 34,88 37,45 lod 3.1 7
Bourran2_2015_nSecLBD_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 35,81 34,88 37,45 lod 4.4 10.4
Bourran1_2004_QTL3_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 46 lod 2,9 6,4
Bourran2_2015_nEpiBC_A4 Qrob_Chr07 7 s_1DP9TW_798 v_8128_173 22,61 22,14 22,73 lod 3.1 8.5
Champenoux_2015_nP_A4 Qrob_Chr02 2 s_1BN4CB_644 v_508_128 23,76 23,06 24,51 lod 2.8 6.2
Champenoux_2015_nPriLBD_A4 Qrob_Chr02 2 s_1CP5DI_1183 s_1A63ZX_1277 25,35 24,63 26,18 lod 4.0 8.7

0 Targeting