Protein : Qrob_P0751190.2 Q. robur
Protein Identifier  ? Qrob_P0751190.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=5) K03347 - cullin 1 Gene Prediction Quality  validated
Protein length 

Sequence

Length: 750  
Kegg Orthology  K03347
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0006511 ubiquitin-dependent protein catabolic process The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin group, or multiple ubiquitin groups, to the protein.
GO:0031625 ubiquitin protein ligase binding Interacting selectively and non-covalently with a ubiquitin protein ligase enzyme, any of the E3 proteins.
GO:0031461 cullin-RING ubiquitin ligase complex Any ubiquitin ligase complex in which the catalytic core consists of a member of the cullin family and a RING domain protein; the core is associated with one or more additional proteins that confer substrate specificity.

40 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pmum:103333883 1 749 + 749 Gaps:11 100.00 738 89.70 0.0 cullin-1
blastp_kegg lcl|pper:PRUPE_ppa001948mg 1 749 + 749 Gaps:11 100.00 738 89.30 0.0 hypothetical protein
blastp_kegg lcl|fve:101303474 1 749 + 749 Gaps:11 100.00 738 88.21 0.0 cullin-1-like
blastp_kegg lcl|tcc:TCM_004565 1 749 + 749 Gaps:11 100.00 738 87.53 0.0 Cullin 1
blastp_kegg lcl|cic:CICLE_v10019010mg 1 749 + 749 Gaps:11 100.00 738 85.64 0.0 hypothetical protein
blastp_kegg lcl|cit:102612067 1 749 + 749 Gaps:11 100.00 738 85.64 0.0 cullin-1-like
blastp_kegg lcl|mdm:103449129 1 749 + 749 Gaps:11 100.00 738 86.18 0.0 cullin-1-like
blastp_kegg lcl|vvi:100233054 2 749 + 748 Gaps:14 99.46 744 86.62 0.0 CUL1 cullin 1
blastp_kegg lcl|brp:103836734 1 749 + 749 Gaps:11 100.00 738 85.64 0.0 cullin-1
blastp_kegg lcl|brp:103858756 1 749 + 749 Gaps:11 100.00 738 85.50 0.0 cullin-1-like
blastp_pdb 4a0k_A 42 749 + 708 Gaps:50 90.84 742 36.94 1e-133 mol:protein length:742 CULLIN-4A
blastp_pdb 2hye_C 42 749 + 708 Gaps:50 88.80 759 36.94 2e-133 mol:protein length:759 Cullin-4A
blastp_pdb 4a0l_H 14 749 + 736 Gaps:50 96.69 726 36.04 6e-127 mol:protein length:726 CULLIN-4B
blastp_pdb 4a0l_E 14 749 + 736 Gaps:50 96.69 726 36.04 6e-127 mol:protein length:726 CULLIN-4B
blastp_pdb 4a0c_E 14 749 + 736 Gaps:50 94.74 741 36.04 2e-126 mol:protein length:741 CULLIN-4B
blastp_pdb 4a0c_C 14 749 + 736 Gaps:50 94.74 741 36.04 2e-126 mol:protein length:741 CULLIN-4B
blastp_pdb 1u6g_A 4 749 + 746 Gaps:86 98.45 776 31.94 5e-109 mol:protein length:776 Cullin homolog 1
blastp_pdb 1ldj_A 8 749 + 742 Gaps:86 100.00 760 31.84 2e-108 mol:protein length:760 Cullin homolog 1
blastp_pdb 1ldk_B 391 749 + 359 Gaps:12 99.18 366 36.64 7e-63 mol:protein length:366 CULLIN HOMOLOG
blastp_pdb 3rtr_G 391 749 + 359 Gaps:12 98.64 368 36.09 2e-60 mol:protein length:368 Cullin-1
blastp_uniprot_sprot sp|Q94AH6|CUL1_ARATH 1 749 + 749 Gaps:11 100.00 738 84.69 0.0 Cullin-1 OS Arabidopsis thaliana GN CUL1 PE 1 SV 1
blastp_uniprot_sprot sp|Q9SRZ0|CUL2_ARATH 1 749 + 749 Gaps:15 100.00 742 67.52 0.0 Cullin-2 OS Arabidopsis thaliana GN CUL2 PE 1 SV 1
blastp_uniprot_sprot sp|P0CH31|CLL1_ARATH 1 749 + 749 Gaps:39 98.75 721 69.80 0.0 Putative cullin-like protein 1 OS Arabidopsis thaliana GN At1g43140 PE 3 SV 1
blastp_uniprot_sprot sp|Q54NZ5|CUL3_DICDI 22 749 + 728 Gaps:73 95.84 769 35.96 2e-141 Cullin-3 OS Dictyostelium discoideum GN culC PE 3 SV 1
blastp_uniprot_sprot sp|Q9XIE9|CLL2_ARATH 6 377 + 372 Gaps:29 92.78 374 61.38 9e-141 Putative cullin-like protein 2 OS Arabidopsis thaliana GN At1g59790 PE 3 SV 2
blastp_uniprot_sprot sp|Q13619|CUL4A_HUMAN 42 749 + 708 Gaps:50 88.80 759 36.94 8e-133 Cullin-4A OS Homo sapiens GN CUL4A PE 1 SV 3
blastp_uniprot_sprot sp|A2A432|CUL4B_MOUSE 14 749 + 736 Gaps:50 72.37 970 36.18 3e-126 Cullin-4B OS Mus musculus GN Cul4b PE 1 SV 1
blastp_uniprot_sprot sp|Q9ZVH4|CUL3A_ARATH 9 749 + 741 Gaps:68 96.58 732 36.07 2e-125 Cullin-3A OS Arabidopsis thaliana GN CUL3A PE 1 SV 1
blastp_uniprot_sprot sp|Q3TCH7|CUL4A_MOUSE 42 749 + 708 Gaps:50 88.80 759 37.09 2e-125 Cullin-4A OS Mus musculus GN Cul4a PE 1 SV 1
blastp_uniprot_sprot sp|Q13620|CUL4B_HUMAN 14 749 + 736 Gaps:50 76.89 913 36.04 1e-124 Cullin-4B OS Homo sapiens GN CUL4B PE 1 SV 4

18 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Gene3D 276 397 122 G3DSA:1.20.1310.10 none none none
Pfam 12 653 642 PF00888 none Cullin family IPR001373
Gene3D 584 651 68 G3DSA:1.10.10.10 none none IPR011991
Gene3D 143 268 126 G3DSA:1.20.1310.10 none none none
ProSitePatterns 722 749 28 PS01256 "UniPathway:UPA00143" Cullin family signature. IPR016157
Gene3D 8 142 135 G3DSA:1.20.1310.10 none none none
Gene3D 652 749 98 G3DSA:1.10.10.10 none none IPR011991
SUPERFAMILY 393 662 270 SSF75632 "UniPathway:UPA00143" none IPR016158
SMART 425 574 150 SM00182 "UniPathway:UPA00143" Cullin IPR016158
Gene3D 398 506 109 G3DSA:1.20.1310.10 none none none
PANTHER 1 749 749 PTHR11932 none none none
Gene3D 511 583 73 G3DSA:4.10.1030.10 none none none
SUPERFAMILY 8 389 382 SSF74788 none none IPR016159
ProSiteProfiles 394 624 231 PS50069 "UniPathway:UPA00143" Cullin family profile. IPR016158
SUPERFAMILY 664 749 86 SSF46785 none none none
SMART 676 743 68 SM00884 "UniPathway:UPA00143" Cullin protein neddylation domain IPR019559
Pfam 676 743 68 PF10557 "UniPathway:UPA00143" Cullin protein neddylation domain IPR019559
PANTHER 1 749 749 PTHR11932:SF60 none none none

0 Localization

2 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2015_nEpis_3P Qrob_Chr12 12 s_1AOES6_1466 s_1B0DDG_1094 28,97 28,55 30,1 lod 3.6 8.4
Bourran2_2015_nP_3P Qrob_Chr12 12 v_10140_295 v_838_303 16 14,69 18,01 lod 5.1 13.7

0 Targeting