Protein : Qrob_P0746180.2 Q. robur
Protein Identifier  ? Qrob_P0746180.2 Organism . Name  Quercus robur
Score  88.0 Score Type  egn
Protein Description  (M=1) PTHR31269:SF2 - S-TYPE ANION CHANNEL SLAH2-RELATED (PTHR31269:SF2) Gene Prediction Quality  validated
Protein length 

Sequence

Length: 358  
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0 Synonyms

4 GO Terms

Identifier Name Description
GO:0055085 transmembrane transport The process in which a solute is transported from one side of a membrane to the other.
GO:0016021 integral component of membrane The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
GO:0008308 voltage-gated anion channel activity Enables the transmembrane transfer of an anion by a voltage-gated channel. An anion is a negatively charged ion. A voltage-gated channel is a channel whose open state is dependent on the voltage across the membrane in which it is embedded.
GO:0006873 cellular ion homeostasis Any process involved in the maintenance of an internal steady state of ions at the level of a cell.

24 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|cic:CICLE_v10019450mg 4 353 + 350 none 60.24 581 85.71 0.0 hypothetical protein
blastp_kegg lcl|cit:102618524 4 353 + 350 none 61.30 571 85.43 0.0 guard cell S-type anion channel SLAC1-like
blastp_kegg lcl|tcc:TCM_016116 4 351 + 348 none 60.21 578 86.21 0.0 C4-dicarboxylate transporter/malic acid transport protein isoform 1
blastp_kegg lcl|pmum:103337331 4 353 + 350 none 62.28 562 84.57 0.0 guard cell S-type anion channel SLAC1
blastp_kegg lcl|mdm:103437183 4 355 + 352 Gaps:1 62.68 560 85.75 0.0 guard cell S-type anion channel SLAC1
blastp_kegg lcl|vvi:100244459 4 354 + 351 Gaps:7 64.74 553 82.68 0.0 guard cell S-type anion channel SLAC1-like
blastp_kegg lcl|cam:101495217 4 354 + 351 Gaps:2 63.47 553 81.48 0.0 guard cell S-type anion channel SLAC1-like
blastp_kegg lcl|pxb:103962362 4 355 + 352 Gaps:1 62.68 560 85.75 0.0 guard cell S-type anion channel SLAC1
blastp_kegg lcl|fve:101314094 4 353 + 350 none 61.95 565 82.29 0.0 guard cell S-type anion channel SLAC1-like
blastp_kegg lcl|pper:PRUPE_ppa023220mg 4 353 + 350 none 62.28 562 84.29 0.0 hypothetical protein
blastp_pdb 3m72_A 34 298 + 265 Gaps:17 82.80 314 23.85 8e-06 mol:protein length:314 Tellurite resistance protein tehA homolog
blastp_uniprot_sprot sp|Q9LD83|SLAC1_ARATH 4 351 + 348 Gaps:2 62.95 556 83.43 0.0 Guard cell S-type anion channel SLAC1 OS Arabidopsis thaliana GN SLAC1 PE 1 SV 1
blastp_uniprot_sprot sp|Q9FLV9|SLAH3_ARATH 4 355 + 352 Gaps:16 55.12 635 53.71 5e-126 S-type anion channel SLAH3 OS Arabidopsis thaliana GN SLAH3 PE 1 SV 1
blastp_uniprot_sprot sp|Q9ASQ7|SLAH2_ARATH 4 351 + 348 Gaps:15 64.55 519 55.82 1e-118 S-type anion channel SLAH2 OS Arabidopsis thaliana GN SLAH2 PE 2 SV 1
blastp_uniprot_sprot sp|Q5E930|SLAH1_ARATH 7 286 + 280 Gaps:6 74.29 385 40.91 9e-71 S-type anion channel SLAH1 OS Arabidopsis thaliana GN SLAH1 PE 2 SV 1
blastp_uniprot_sprot sp|A8MRV9|SLAH4_ARATH 34 299 + 266 Gaps:8 72.33 365 43.56 4e-69 S-type anion channel SLAH4 OS Arabidopsis thaliana GN SLAH4 PE 2 SV 1
blastp_uniprot_sprot sp|P25396|TEHA_ECOLI 20 297 + 278 Gaps:12 83.64 330 22.46 1e-06 Tellurite resistance protein TehA OS Escherichia coli (strain K12) GN tehA PE 1 SV 1
rpsblast_cdd gnl|CDD|187763 4 297 + 294 Gaps:8 96.30 297 34.62 4e-77 cd09323 TDT_SLAC1_like Tellurite-resistance/Dicarboxylate Transporter (TDT) family includes SLAC1 (Slow Anion Channel-Associated 1). SLAC1 (Slow Anion Channel-Associated 1) is a plasma membrane protein preferentially expressed in guard cells which encodes a distant homolog of fungal and bacterial dicarboxylate/malic acid transport proteins. It is essential for stomatal closure in response to carbon dioxide abscisic acid ozone light/dark transitions humidity change calcium ions hydrogen peroxide and nitric oxide. In the Arabidopsis genome SLAC1 is part of a gene family with five members and encodes a membrane protein that has ten putative transmembrane domains flanked by large N- and C-terminal domains. Mutations in SLAC1 impair slow (S-type) anion channel currents that are activated by cytosolic calcium ions and abscisic acid but do not affect rapid (R-type) anion channel currents or calcium ion channel function.
rpsblast_cdd gnl|CDD|187762 14 294 + 281 Gaps:5 96.19 289 28.78 1e-53 cd09322 TDT_TehA_like The Tellurite-resistance/Dicarboxylate Transporter (TDT) family includes TehA proteins. The Tellurite-resistance/Dicarboxylate Transporter (TDT) family includes members from all three kingdoms but only three members of the family have been functionally characterized: the TehA protein of E. coli functioning as a tellurite-resistance uptake permease the Mae1 protein of S. pombe functioning in the uptake of malate and other dicarboxylates and the sulfite efflux pump (SSU1) of Saccharomyces cerevisiae. In plants the plasma membrane protein SLAC1 (Slow Anion Channel-Associated 1) which is preferentially expressed in guard cells encodes a distant homolog of fungal and bacterial dicarboxylate/malic acid transport proteins. SLAC1 is essential in mediating stomatal responses to physiological and stress stimuli. Members of the TDT family exhibit 10 putative transmembrane a-helical spanners (TMSs).
rpsblast_cdd gnl|CDD|202696 4 298 + 295 Gaps:18 95.86 314 25.25 6e-41 pfam03595 C4dic_mal_tran C4-dicarboxylate transporter/malic acid transport protein. This family of transporters have ten alpha helical transmembrane segments. The structure of a bacterial homologue of SLAC1 shows it to have a trimeric arrangement. The pore is composed of five helices with a conserved phe residue involved in gating. One homologue Mae1 from the yeast Schizosaccharomyces pombe functions as a malate uptake transporter another Ssu1 from Saccharomyces cerevisiae and other fungi including Aspergillus fumigatus is characterized as a sulphite efflux pump and TehA from Escherichia coli is identified as a tellurite resistance protein by virtue of its association in the tehA/tehB operon. Many homologues are incorrectly annotated as tellurite resistance/dicarboxylate transporter (TDT) proteins.
rpsblast_cdd gnl|CDD|187764 12 298 + 287 Gaps:31 93.02 301 25.36 2e-14 cd09324 TDT_TehA Tellurite-resistance/Dicarboxylate Transporter (TDT) family includes TehA protein. This subfamily includes Tellurite resistance protein TehA that belongs to the C4-dicarboxylate transporter/malic acid transport (TDT) protein family and is a homolog of plant Slow Anion Channel-Associated 1 (SLAC1). The tehA gene encodes an integral membrane protein that has been shown to have efflux activity of quaternary ammonium compounds. TehA protein of Escherichia coli functions as a tellurite-resistance uptake permease.
rpsblast_cdd gnl|CDD|31466 34 302 + 269 Gaps:7 82.67 329 20.96 9e-13 COG1275 TehA Tellurite resistance protein and related permeases [Inorganic ion transport and metabolism].
rpsblast_cdd gnl|CDD|182709 4 298 + 295 Gaps:29 88.89 324 22.92 3e-12 PRK10764 PRK10764 potassium-tellurite ethidium and proflavin transporter Provisional.
rpsblast_cdd gnl|CDD|188085 15 297 + 283 Gaps:20 92.81 320 20.88 6e-12 TIGR00816 tdt C4-dicarboxylate transporter/malic acid transport protein. The Tellurite-Resistance/Dicarboxylate Transporter (TDT) Family (TC 2.A.16)Two members of the TDT family have been functionally characterized. One is the TehA protein of E. coli which has been implicated in resistance to tellurite the other is the Mae1 protein of S. pombe which functions in the uptake of malate and other dicarboxylates by a proton symportmechanism. These proteins exhibit 10 putative transmembrane a-helicalspanners (TMSs).

20 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 117 159 43 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
PANTHER 6 351 346 PTHR31269 none none IPR030183
Phobius 249 267 19 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 95 116 22 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 32 57 26 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 69 89 21 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 268 278 11 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
PANTHER 6 351 346 PTHR31269:SF2 none none none
Phobius 58 68 11 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 244 248 5 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 304 357 54 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 160 180 21 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 223 243 21 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 212 222 11 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 192 211 20 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Pfam 6 298 293 PF03595 none Voltage-dependent anion channel IPR004695
Phobius 1 31 31 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 90 94 5 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 181 191 11 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 279 303 25 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none

9 Localization

Analysis Start End Length
TMHMM 160 177 17
TMHMM 190 212 22
TMHMM 222 240 18
TMHMM 245 267 22
TMHMM 95 117 22
TMHMM 72 91 19
TMHMM 282 304 22
TMHMM 29 51 22
TMHMM 130 150 20

4 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6
Bourran2_2015_nP_3P Qrob_Chr12 12 v_10140_295 v_838_303 16 14,69 18,01 lod 5.1 13.7
Bourran2_2015_nSecLBD_3P Qrob_Chr12 12 s_A4YYC_633 s_2F1IZB_703 18,64 18,01 21,53 lod 6.5 17.2
Bourran2_2014_nSeqBC_3P Qrob_Chr12 12 s_1EO8V5_710 s_1A2VMU_355 11,04 0 32,58 lod 1,7196 4,7

0 Targeting