Protein : Qrob_P0734790.2 Q. robur
Protein Identifier  ? Qrob_P0734790.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=1) KOG0901//KOG1754//KOG3422 - 60S ribosomal protein L14/L17/L23 [Translation ribosomal structure and biogenesis]. // 40S ribosomal protein S15/S22 [Translation ribosomal structure and biogenesis]. // Mitochondrial ribosomal protein L16 [Translation ribosomal structure and biogenesis]. Gene Prediction Quality  validated
Protein length 

Sequence

Length: 456  
Paste the following link
Lists
This Protein isn't in any lists. Upload a list.

Sequence Feature Displayer

Protein Sequence Displayer

J Browse Displayer

0 Synonyms

9 GO Terms

Identifier Name Description
GO:0003723 RNA binding Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
GO:0003735 structural constituent of ribosome The action of a molecule that contributes to the structural integrity of the ribosome.
GO:0005622 intracellular The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
GO:0005840 ribosome An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins.
GO:0006412 translation The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA. Translation ends with the release of a polypeptide chain from the ribosome.
GO:0015934 large ribosomal subunit The larger of the two subunits of a ribosome. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site).
GO:0003743 translation initiation factor activity Functions in the initiation of ribosome-mediated translation of mRNA into a polypeptide.
GO:0019843 rRNA binding Interacting selectively and non-covalently with ribosomal RNA.
GO:0006413 translational initiation The process preceding formation of the peptide bond between the first two amino acids of a protein. This includes the formation of a complex of the ribosome, mRNA, and an initiation complex that contains the first aminoacyl-tRNA.

43 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|rcu:RCOM_1708060 20 230 + 211 Gaps:36 74.15 236 86.29 9e-95 50S ribosomal protein L14 putative
blastp_kegg lcl|rcu:RCOM_1654640 1 190 + 190 Gaps:37 100.00 155 75.48 7e-71 50S ribosomal protein L16 putative
blastp_kegg lcl|pda:8890547 231 358 + 128 none 96.97 132 89.84 5e-70 rps8 PhdaC_p058 30S ribosomal protein S8
blastp_kegg lcl|pda:8890548 115 230 + 116 none 95.08 122 93.97 2e-69 rpl14 PhdaC_p059 50S ribosomal protein L14
blastp_kegg lcl|sot:4099880 116 230 + 115 none 94.26 122 90.43 6e-66 rpl14 SotuCp059 50S ribosomal protein L14
blastp_kegg lcl|sly:3950421 116 230 + 115 none 94.26 122 90.43 6e-66 rpl14 LyesC2p033 ribosomal protein L14
blastp_kegg lcl|atr:s02809p00000680 1 116 + 116 none 97.48 119 85.34 7e-66 AMTR_s02809p00000680 hypothetical protein
blastp_kegg lcl|pmum:18668068 116 230 + 115 none 94.26 122 91.30 8e-66 rpl14 CP95_p030 ribosomal protein L14
blastp_kegg lcl|pper:PrpeC_p058 116 230 + 115 none 94.26 122 91.30 8e-66 rpl14 ribosomal protein L14
blastp_kegg lcl|sly:101259965 116 230 + 115 none 75.66 152 90.43 8e-66 50S ribosomal protein L14 chloroplastic-like
blastp_pdb 3bbn_H 231 358 + 128 Gaps:2 97.01 134 80.00 1e-61 mol:protein length:134 Ribosomal Protein S8
blastp_pdb 3bbo_O 1 116 + 116 none 85.93 135 86.21 2e-61 mol:protein length:135 Ribosomal Protein L16
blastp_pdb 3bbo_M 116 230 + 115 Gaps:1 94.21 121 85.96 2e-61 mol:protein length:121 Ribosomal Protein L14
blastp_pdb 3dll_J 1 117 + 117 none 82.39 142 59.83 7e-42 mol:protein length:142 50S ribosomal protein L16
blastp_pdb 3cf5_J 1 117 + 117 none 82.39 142 59.83 7e-42 mol:protein length:142 50S RIBOSOMAL PROTEIN L16
blastp_pdb 2zjr_J 1 117 + 117 none 82.39 142 59.83 7e-42 mol:protein length:142 50S ribosomal protein L16
blastp_pdb 2zjq_J 1 117 + 117 none 82.39 142 59.83 7e-42 mol:protein length:142 50S ribosomal protein L16
blastp_pdb 2zjp_J 1 117 + 117 none 82.39 142 59.83 7e-42 mol:protein length:142 50S RIBOSOMAL PROTEIN L16
blastp_pdb 1sm1_K 1 117 + 117 none 82.39 142 59.83 7e-42 mol:protein length:142 50S RIBOSOMAL PROTEIN L16
blastp_pdb 1nkw_K 1 117 + 117 none 82.39 142 59.83 7e-42 mol:protein length:142 50S ribosomal protein L16
blastp_uniprot_sprot sp|Q3BAJ9|RK16_PHAAO 1 116 + 116 none 85.93 135 92.24 8e-71 50S ribosomal protein L16 chloroplastic OS Phalaenopsis aphrodite subsp. formosana GN rpl16 PE 3 SV 1
blastp_uniprot_sprot sp|A8SEE1|RK16_CERDE 1 116 + 116 none 85.93 135 92.24 9e-71 50S ribosomal protein L16 chloroplastic OS Ceratophyllum demersum GN rpl16 PE 3 SV 1
blastp_uniprot_sprot sp|A6MMY1|RK14_ILLOL 116 230 + 115 none 94.26 122 93.91 7e-70 50S ribosomal protein L14 chloroplastic OS Illicium oligandrum GN rpl14 PE 3 SV 1
blastp_uniprot_sprot sp|A6MMY2|RK16_ILLOL 1 116 + 116 none 85.29 136 90.52 1e-69 50S ribosomal protein L16 chloroplastic OS Illicium oligandrum GN rpl16 PE 3 SV 1
blastp_uniprot_sprot sp|A8Y9C4|RK16_LOLPR 1 118 + 118 none 86.76 136 86.44 1e-69 50S ribosomal protein L16 chloroplastic OS Lolium perenne GN rpl16 PE 3 SV 1
blastp_uniprot_sprot sp|A6MM74|RK16_BUXMI 1 116 + 116 none 85.29 136 91.38 1e-69 50S ribosomal protein L16 chloroplastic OS Buxus microphylla GN rpl16 PE 3 SV 1
blastp_uniprot_sprot sp|Q0G9I2|RK14_LIRTU 116 230 + 115 none 94.26 122 93.04 2e-69 50S ribosomal protein L14 chloroplastic OS Liriodendron tulipifera GN rpl14 PE 3 SV 1
blastp_uniprot_sprot sp|A6MMF9|RK14_CHLSC 116 230 + 115 none 94.26 122 93.04 3e-69 50S ribosomal protein L14 chloroplastic OS Chloranthus spicatus GN rpl14 PE 3 SV 1
blastp_uniprot_sprot sp|Q7YJU1|RK16_CALFG 1 116 + 116 none 85.93 135 90.52 3e-69 50S ribosomal protein L16 chloroplastic OS Calycanthus floridus var. glaucus GN rpl16 PE 3 SV 1
blastp_uniprot_sprot sp|Q0G9I1|RK16_LIRTU 1 116 + 116 none 87.22 133 90.52 7e-69 50S ribosomal protein L16 chloroplastic OS Liriodendron tulipifera GN rpl16 PE 3 SV 1

31 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Gene3D 116 230 115 G3DSA:2.40.150.20 none none IPR023571
SMART 381 449 69 SM00316 none Ribosomal protein S1-like RNA-binding domain IPR022967
PANTHER 231 362 132 PTHR11758 none none IPR000630
TIGRFAM 114 229 116 TIGR01067 none rplN_bact: ribosomal protein uL14 IPR005745
TIGRFAM 1 111 111 TIGR01164 none rplP_bact: ribosomal protein uL16 IPR000114
PANTHER 231 362 132 PTHR11758:SF9 none none none
ProSitePatterns 66 77 12 PS00701 none Ribosomal protein L16 signature 2. IPR020798
TIGRFAM 380 448 69 TIGR00008 none infA: translation initiation factor IF-1 IPR004368
Hamap 108 230 123 MF_01367 none 50S ribosomal protein L14 [rplN]. IPR000218
Hamap 231 362 132 MF_01302_B none 30S ribosomal protein S8 [rpsH]. IPR000630
Pfam 234 361 128 PF00410 none Ribosomal protein S8 IPR000630
ProSiteProfiles 374 449 76 PS50832 none S1 domain IF1 type profile. IPR006196
Gene3D 7 115 109 G3DSA:3.90.1170.10 none none IPR016180
SUPERFAMILY 115 230 116 SSF50193 none none IPR023571
SUPERFAMILY 231 361 131 SSF56047 none none IPR000630
Pfam 3 116 114 PF00252 none Ribosomal protein L16p/L10e IPR016180
ProSitePatterns 332 349 18 PS00053 none Ribosomal protein S8 signature. IPR000630
PRINTS 72 101 30 PR00060 none Ribosomal protein L16 signature IPR000114
PRINTS 26 37 12 PR00060 none Ribosomal protein L16 signature IPR000114
PRINTS 8 20 13 PR00060 none Ribosomal protein L16 signature IPR000114
PRINTS 42 71 30 PR00060 none Ribosomal protein L16 signature IPR000114
ProSitePatterns 43 54 12 PS00586 none Ribosomal protein L16 signature 1. IPR020798
ProSitePatterns 168 194 27 PS00049 none Ribosomal protein L14 signature. IPR019972
Gene3D 380 448 69 G3DSA:2.40.50.140 none none IPR012340
Hamap 378 449 72 MF_00075 none Translation initiation factor IF-1 [infA]. IPR004368
SUPERFAMILY 380 448 69 SSF50249 none none IPR012340
Gene3D 307 361 55 G3DSA:3.30.1490.10 none none none
Pfam 115 230 116 PF00238 none Ribosomal protein L14p/L23e IPR000218
Pfam 387 447 61 PF01176 none Translation initiation factor 1A / IF-1 IPR006196
SUPERFAMILY 1 116 116 SSF54686 none none IPR016180

0 Localization

0 Qtllist

0 Targeting