Protein : Qrob_P0734770.2 Q. robur
Protein Identifier  ? Qrob_P0734770.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=6) K02959 - small subunit ribosomal protein S16 Gene Prediction Quality  validated
Protein length 

Sequence

Length: 64  
Kegg Orthology  K02959
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0 Synonyms

5 GO Terms

Identifier Name Description
GO:0003735 structural constituent of ribosome The action of a molecule that contributes to the structural integrity of the ribosome.
GO:0005622 intracellular The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
GO:0005840 ribosome An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins.
GO:0006412 translation The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA. Translation ends with the release of a polypeptide chain from the ribosome.
GO:0009536 plastid Any member of a family of organelles found in the cytoplasm of plants and some protists, which are membrane-bounded and contain DNA. Plant plastids develop from a common type, the proplastid.

35 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pmum:18667995 3 63 + 61 none 70.11 87 88.52 3e-32 rps16 CP95_p085 ribosomal protein S16
blastp_kegg lcl|pper:PrpeC_p003 3 63 + 61 none 68.54 89 86.89 8e-32 rps16 ribosomal protein S16
blastp_kegg lcl|gmx:3989305 3 63 + 61 none 68.54 89 85.25 1e-31 rps16 GlmaCp029 ribosomal protein S16
blastp_kegg lcl|fve:10251483 3 63 + 61 none 68.54 89 85.25 2e-30 rps16 FvH4_C0005 ribosomal protein S16
blastp_kegg lcl|tcc:ThcaC_p003 3 63 + 61 Gaps:1 68.18 88 88.33 2e-29 rps16 ribosomal protein S16
blastp_kegg lcl|csv:3429310 3 58 + 56 none 66.67 84 89.29 5e-29 rps16 CsCp004 ribosomal protein S16
blastp_kegg lcl|vvi:4025122 3 63 + 61 Gaps:1 68.13 91 83.87 5e-29 rps16 ViviCp003 ribosomal protein S16
blastp_kegg lcl|cit:4271244 3 58 + 56 none 63.64 88 83.93 2e-27 rps16 CisiCp003 ribosomal protein S16
blastp_kegg lcl|sot:4099950 3 63 + 61 Gaps:1 68.18 88 80.00 1e-24 rps16 SotuCp003 ribosomal protein S16
blastp_kegg lcl|sly:3950458 3 63 + 61 Gaps:1 68.18 88 80.00 1e-24 rps16 LyesC2p087 ribosomal protein S16
blastp_pdb 3bbn_P 3 63 + 61 Gaps:1 68.18 88 75.00 1e-24 mol:protein length:88 Ribosomal Protein S16
blastp_pdb 3fic_P 3 53 + 51 Gaps:3 64.29 84 37.04 5e-06 mol:protein length:84 30S ribosomal protein S16
blastp_pdb 3pyu_P 3 53 + 51 Gaps:3 65.06 83 37.04 5e-06 mol:protein length:83 30S ribosomal protein S16
blastp_pdb 3pys_P 3 53 + 51 Gaps:3 65.06 83 37.04 5e-06 mol:protein length:83 30S ribosomal protein S16
blastp_pdb 3pyq_P 3 53 + 51 Gaps:3 65.06 83 37.04 5e-06 mol:protein length:83 30S ribosomal protein S16
blastp_pdb 3pyn_P 3 53 + 51 Gaps:3 65.06 83 37.04 5e-06 mol:protein length:83 30S ribosomal protein S16
blastp_pdb 3ms0_P 3 53 + 51 Gaps:3 65.06 83 37.04 5e-06 mol:protein length:83 30S ribosomal protein S16
blastp_pdb 3mr8_P 3 53 + 51 Gaps:3 65.06 83 37.04 5e-06 mol:protein length:83 30S ribosomal protein S16
blastp_pdb 1voz_P 3 53 + 51 Gaps:3 65.06 83 37.04 5e-06 mol:protein length:83 30S ribosomal protein S16
blastp_pdb 1vox_P 3 53 + 51 Gaps:3 65.06 83 37.04 5e-06 mol:protein length:83 30S ribosomal protein S16
blastp_uniprot_sprot sp|Q09X35|RR16_MORIN 3 63 + 61 none 68.54 89 90.16 3e-35 30S ribosomal protein S16 chloroplastic OS Morus indica GN rps16 PE 3 SV 1
blastp_uniprot_sprot sp|Q2PMS5|RR16_SOYBN 3 63 + 61 none 68.54 89 85.25 5e-33 30S ribosomal protein S16 chloroplastic OS Glycine max GN rps16 PE 3 SV 1
blastp_uniprot_sprot sp|Q2QDA6|RR16_CUCSA 3 58 + 56 none 65.88 85 89.29 2e-30 30S ribosomal protein S16 chloroplastic OS Cucumis sativus GN rps16 PE 3 SV 1
blastp_uniprot_sprot sp|Q0ZJ38|RR16_VITVI 3 63 + 61 Gaps:1 68.13 91 83.87 2e-30 30S ribosomal protein S16 chloroplastic OS Vitis vinifera GN rps16 PE 3 SV 1
blastp_uniprot_sprot sp|Q6EW66|RR16_NYMAL 3 58 + 56 none 65.12 86 87.50 4e-30 30S ribosomal protein S16 chloroplastic OS Nymphaea alba GN rps16 PE 3 SV 1
blastp_uniprot_sprot sp|Q06H15|RR16_DRIGR 3 58 + 56 none 62.92 89 85.71 2e-29 30S ribosomal protein S16 chloroplastic OS Drimys granadensis GN rps16 PE 3 SV 1
blastp_uniprot_sprot sp|Q2L8Y7|RR16_GOSHI 3 58 + 56 none 63.64 88 85.71 2e-29 30S ribosomal protein S16 chloroplastic OS Gossypium hirsutum GN rps16 PE 3 SV 1
blastp_uniprot_sprot sp|A0ZZ17|RR16_GOSBA 3 58 + 56 none 63.64 88 85.71 2e-29 30S ribosomal protein S16 chloroplastic OS Gossypium barbadense GN rps16 PE 3 SV 1
blastp_uniprot_sprot sp|Q0G9N7|RR16_LIRTU 3 58 + 56 none 65.12 86 85.71 2e-29 30S ribosomal protein S16 chloroplastic OS Liriodendron tulipifera GN rps16 PE 3 SV 1
blastp_uniprot_sprot sp|Q06GS8|RR16_PIPCE 3 63 + 61 none 62.89 97 77.05 5e-29 30S ribosomal protein S16 chloroplastic OS Piper cenocladum GN rps16 PE 3 SV 1

6 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Pfam 3 38 36 PF00886 none Ribosomal protein S16 IPR000307
Gene3D 3 53 51 G3DSA:3.30.1320.10 none none IPR023803
PANTHER 3 53 51 PTHR12919 none none IPR000307
TIGRFAM 3 51 49 TIGR00002 none S16: ribosomal protein bS16 IPR000307
PANTHER 3 53 51 PTHR12919:SF21 none none IPR026994
SUPERFAMILY 3 56 54 SSF54565 none none IPR023803

0 Localization

0 Qtllist

0 Targeting