Protein : Qrob_P0726020.2 Q. robur
Protein Identifier  ? Qrob_P0726020.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=5) KOG0252//KOG0253//KOG0254//KOG0255//KOG0569//KOG2532 - Inorganic phosphate transporter [Inorganic ion transport and metabolism]. // Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]. // Predicted transporter (major facilitator superfamily) [General function prediction only]. // Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]. // Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]. // Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]. Gene Prediction Quality  validated
Protein length 

Sequence

Length: 740  
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0 Synonyms

6 GO Terms

Identifier Name Description
GO:0016020 membrane A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
GO:0055085 transmembrane transport The process in which a solute is transported from one side of a membrane to the other.
GO:0016021 integral component of membrane The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
GO:0022857 transmembrane transporter activity Enables the transfer of a substance from one side of a membrane to the other.
GO:0022891 substrate-specific transmembrane transporter activity Enables the transfer of a specific substance or group of related substances from one side of a membrane to the other.
GO:0005215 transporter activity Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of or within a cell, or between cells.

36 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|tcc:TCM_034436 1 739 + 739 none 100.00 739 84.57 0.0 Tonoplast monosaccharide transporter2 isoform 1
blastp_kegg lcl|rcu:RCOM_1601940 1 739 + 739 none 100.00 739 82.27 0.0 sugar transporter putative (EC:1.3.1.74)
blastp_kegg lcl|cic:CICLE_v10000400mg 1 736 + 736 Gaps:1 99.86 738 82.63 0.0 hypothetical protein
blastp_kegg lcl|cit:102628821 1 736 + 736 Gaps:1 99.86 738 82.63 0.0 monosaccharide-sensing protein 2-like
blastp_kegg lcl|pop:POPTR_0002s00760g 1 726 + 726 none 98.37 738 81.68 0.0 POPTRDRAFT_550737 hypothetical protein
blastp_kegg lcl|pop:POPTR_0005s27680g 1 737 + 737 none 99.86 738 81.95 0.0 POPTRDRAFT_559987 hypothetical protein
blastp_kegg lcl|pmum:103336635 1 739 + 739 Gaps:2 100.00 739 81.87 0.0 monosaccharide-sensing protein 2
blastp_kegg lcl|pper:PRUPE_ppa001932mg 1 739 + 739 Gaps:2 100.00 739 82.14 0.0 hypothetical protein
blastp_kegg lcl|fve:101293097 1 739 + 739 Gaps:9 100.00 738 81.44 0.0 monosaccharide-sensing protein 2-like
blastp_kegg lcl|pxb:103961755 2 739 + 738 Gaps:3 99.73 739 81.68 0.0 monosaccharide-sensing protein 2
blastp_uniprot_sprot sp|Q8LPQ8|MSSP2_ARATH 1 739 + 739 Gaps:16 100.00 729 69.27 0.0 Monosaccharide-sensing protein 2 OS Arabidopsis thaliana GN MSSP2 PE 2 SV 2
blastp_uniprot_sprot sp|Q96290|MSSP1_ARATH 1 739 + 739 Gaps:29 99.73 734 67.62 0.0 Monosaccharide-sensing protein 1 OS Arabidopsis thaliana GN MSSP1 PE 1 SV 2
blastp_uniprot_sprot sp|Q9SD00|MSSP3_ARATH 1 738 + 738 Gaps:44 99.31 729 63.40 0.0 Monosaccharide-sensing protein 3 OS Arabidopsis thaliana GN MSSP3 PE 2 SV 1
blastp_uniprot_sprot sp|C0SPB2|YWTG_BACSU 12 739 + 728 Gaps:14 95.62 457 34.32 4e-37 Putative metabolite transport protein YwtG OS Bacillus subtilis (strain 168) GN ywtG PE 3 SV 1
blastp_uniprot_sprot sp|Q9C757|INT2_ARATH 7 725 + 719 Gaps:20 72.07 580 40.67 6e-37 Probable inositol transporter 2 OS Arabidopsis thaliana GN INT2 PE 1 SV 1
blastp_uniprot_sprot sp|Q9ZQP6|INT3_ARATH 7 729 + 723 Gaps:28 75.00 580 37.70 2e-35 Probable inositol transporter 3 OS Arabidopsis thaliana GN INT3 PE 2 SV 1
blastp_uniprot_sprot sp|P46333|CSBC_BACSU 12 722 + 711 Gaps:15 91.76 461 34.99 5e-34 Probable metabolite transport protein CsbC OS Bacillus subtilis (strain 168) GN csbC PE 1 SV 3
blastp_uniprot_sprot sp|P94493|YNCC_BACSU 6 726 + 721 Gaps:34 88.54 471 34.29 1e-33 Putative metabolite transport protein YncC OS Bacillus subtilis (strain 168) GN yncC PE 3 SV 2
blastp_uniprot_sprot sp|O23492|INT4_ARATH 7 729 + 723 Gaps:26 78.01 582 37.22 1e-33 Inositol transporter 4 OS Arabidopsis thaliana GN INT4 PE 1 SV 1
blastp_uniprot_sprot sp|Q96QE2|MYCT_HUMAN 6 726 + 721 Gaps:19 68.06 648 33.79 8e-32 Proton myo-inositol cotransporter OS Homo sapiens GN SLC2A13 PE 1 SV 3
rpsblast_cdd gnl|CDD|200987 7 726 + 720 Gaps:31 97.77 449 32.35 3e-44 pfam00083 Sugar_tr Sugar (and other) transporter.
rpsblast_cdd gnl|CDD|162084 4 722 + 719 Gaps:27 91.68 481 35.37 4e-39 TIGR00879 SP MFS transporter sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083).
rpsblast_cdd gnl|CDD|182225 7 725 + 719 Gaps:47 93.74 479 30.07 2e-33 PRK10077 xylE D-xylose transporter XylE Provisional.
rpsblast_cdd gnl|CDD|162097 19 207 + 189 Gaps:16 36.24 505 33.88 3e-24 TIGR00898 2A0119 cation transport protein.
rpsblast_cdd gnl|CDD|119392 9 709 + 701 Gaps:23 99.43 352 34.57 1e-23 cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters symporters and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions sugar phosphates drugs neurotransmitters nucleosides amino acids and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate while symporters and antiporters transport two substrates in the same or in opposite directions respectively across membranes. MFS proteins are typically 400 to 600 amino acids in length and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members GlpT (glycerol-3-phosphate transporter) LacY (lactose permease) and EmrD (multidrug transporter) MFS proteins are thought to function through a single substrate binding site alternating-access mechanism involving a rocker-switch type of movement. Bacterial members function primarily for nutrient uptake and as drug-efflux pumps to confer antibiotic resistance. Some MFS proteins have medical significance in humans such as the glucose transporter Glut4 which is impaired in type II diabetes and glucose-6-phosphate transporter (G6PT) which causes glycogen storage disease when mutated..
rpsblast_cdd gnl|CDD|191813 7 203 + 197 Gaps:6 96.53 346 27.84 2e-19 pfam07690 MFS_1 Major Facilitator Superfamily.
rpsblast_cdd gnl|CDD|162095 6 202 + 197 Gaps:14 48.99 398 28.72 2e-13 TIGR00895 2A0115 benzoate transport.
rpsblast_cdd gnl|CDD|130366 35 206 + 172 Gaps:20 24.53 742 29.12 4e-12 TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by PFAM HMM pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
rpsblast_cdd gnl|CDD|162085 44 186 + 143 Gaps:2 100.00 141 31.21 1e-10 TIGR00880 2_A_01_02 Multidrug resistance protein.
rpsblast_cdd gnl|CDD|188094 48 183 + 136 Gaps:29 35.28 394 30.22 7e-10 TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083) including citrate-H+ symporters dicarboxylate:H+ symporters the proline/glycine-betaine transporter ProP etc.

47 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Gene3D 519 716 198 G3DSA:1.20.1250.20 none none none
Gene3D 10 187 178 G3DSA:1.20.1250.20 none none none
Phobius 623 648 26 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
ProSitePatterns 103 128 26 PS00217 none Sugar transport proteins signature 2. IPR005829
SUPERFAMILY 495 720 226 SSF103473 none none IPR020846
SUPERFAMILY 6 210 205 SSF103473 none none IPR020846
Phobius 15 19 5 SIGNAL_PEPTIDE_C_REGION none C-terminal region of a signal peptide. none
Phobius 156 160 5 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 649 659 11 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 517 539 23 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
PANTHER 1 223 223 PTHR24063:SF305 none none none
PANTHER 495 727 233 PTHR24063:SF305 none none none
PRINTS 98 117 20 PR00171 "Reactome:REACT_15518" Sugar transporter signature IPR003663
PRINTS 528 538 11 PR00171 "Reactome:REACT_15518" Sugar transporter signature IPR003663
PRINTS 627 648 22 PR00171 "Reactome:REACT_15518" Sugar transporter signature IPR003663
PRINTS 15 25 11 PR00171 "Reactome:REACT_15518" Sugar transporter signature IPR003663
PRINTS 650 662 13 PR00171 "Reactome:REACT_15518" Sugar transporter signature IPR003663
Phobius 1 2 2 SIGNAL_PEPTIDE_N_REGION none N-terminal region of a signal peptide. none
PANTHER 495 727 233 PTHR24063 none none none
PANTHER 247 253 7 PTHR24063 none none none
Phobius 686 709 24 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 660 680 21 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
PANTHER 1 223 223 PTHR24063 none none none
Pfam 7 217 211 PF00083 none Sugar (and other) transporter IPR005828
Pfam 509 726 218 PF00083 none Sugar (and other) transporter IPR005828
PANTHER 247 253 7 PTHR24063:SF305 none none none
Phobius 73 92 20 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 594 617 24 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 540 562 23 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 131 155 25 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none

11 Localization

Analysis Start End Length
TMHMM 626 648 22
TMHMM 10 32 22
TMHMM 73 90 17
TMHMM 44 63 19
TMHMM 594 616 22
TMHMM 161 183 22
TMHMM 97 119 22
TMHMM 563 582 19
TMHMM 686 708 22
TMHMM 660 682 22
TMHMM 134 156 22

16 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2003_QTL2_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 87 lod 3,3 8,7
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL2_d13Cf Qrob_Chr02 2 s_1AQA4Z_1644 s_1AK5QX_947 53.67 14,01 79,68 lod 5.6594 0.03
Bourran1_2004_QTL2_peak_Bud_burst_3P Qrob_Chr02 2 s_1AW12F_382 s_1A77MR_223 42 6 64 lod 3,6 9,6
Bourran2_2002_QTL9_peak_Bud_burst_A4 Qrob_Chr02 2 s_1BFNDA_375 s_1A3VA1_2139 32,5 17 62 lod 3,1 4,2
Bourran2_2003_QTL8_peak_Bud_burst_3P Qrob_Chr02 2 s_1ANG6_1446 v_11270_161 40 0 72 lod 4,4 9,9
Bourran2_2014_nP_A4 Qrob_Chr11 11 s_1B58GB_1413 s_1A5BYY_1671 11,15 0 42,38 lod 1,8913 4,5
Bourran2_2015_nPriLBD_A4 Qrob_Chr02 2 s_1CP5DI_1183 s_1A63ZX_1277 24,87 24,63 26,18 lod 3.8 7
Bourran2_2015_nEpis_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 34,94 34,88 37,45 lod 3.1 7
Bourran2_2015_nSecLBD_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 35,81 34,88 37,45 lod 4.4 10.4
Bourran1_2003_QTL1_peak_Bud_burst_3P Qrob_Chr02 2 s_1AR8KI_1183 s_1B0QB1_473 22 6 41 lod 4,2 11,5
Bourran1_2004_QTL3_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 46 lod 2,9 6,4
Bourran2_2015_nEpiBC_A4 Qrob_Chr07 7 s_1DP9TW_798 v_8128_173 22,61 22,14 22,73 lod 3.1 8.5
Champenoux_2015_nEpis_A4 Qrob_Chr02 2 s_1BAGIZ_823 s_1BN4CB_644 23,06 23,06 23,06 lod 4.9 11
Champenoux_2015_nP_A4 Qrob_Chr02 2 s_1BN4CB_644 v_508_128 23,76 23,06 24,51 lod 2.8 6.2
Champenoux_2015_nPriLBD_A4 Qrob_Chr02 2 s_1CP5DI_1183 s_1A63ZX_1277 25,35 24,63 26,18 lod 4.0 8.7
Champenoux_2015_nSecLBD_A4 Qrob_Chr02 2 s_1AN4ZM_1665 v_8587_238 18,52 18,89 18,27 lod 3.2 7.4

0 Targeting