Protein : Qrob_P0725560.2 Q. robur
Protein Identifier  ? Qrob_P0725560.2 Organism . Name  Quercus robur
Score  98.1 Score Type  egn
Protein Description  (M=1) PTHR12472 - RAB3-GAP REGULATORY DOMAIN Gene Prediction Quality  validated
Protein length 

Sequence

Length: 412  
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0 Synonyms

1 GO Terms

Identifier Name Description
GO:0043087 regulation of GTPase activity Any process that modulates the rate of GTP hydrolysis by a GTPase.

15 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|vvi:100241866 10 406 + 397 Gaps:4 86.00 457 77.61 0.0 rab3 GTPase-activating protein non-catalytic subunit-like
blastp_kegg lcl|pxb:103926877 6 406 + 401 Gaps:7 86.98 453 77.16 0.0 rab3 GTPase-activating protein non-catalytic subunit
blastp_kegg lcl|mdm:103444882 6 406 + 401 Gaps:7 86.98 453 76.65 0.0 rab3 GTPase-activating protein non-catalytic subunit
blastp_kegg lcl|rcu:RCOM_0105730 6 406 + 401 Gaps:9 80.99 484 75.26 0.0 rab3 gtpase-activating protein non-catalytic subunit putative
blastp_kegg lcl|pper:PRUPE_ppa005570mg 10 406 + 397 Gaps:9 85.90 454 76.92 0.0 hypothetical protein
blastp_kegg lcl|pmum:103326112 10 406 + 397 Gaps:9 85.90 454 76.92 0.0 rab3 GTPase-activating protein non-catalytic subunit
blastp_kegg lcl|fve:101294149 10 406 + 397 Gaps:12 86.00 450 76.23 0.0 rab3 GTPase-activating protein non-catalytic subunit-like
blastp_kegg lcl|mdm:103448772 6 406 + 401 Gaps:8 86.95 452 74.30 0.0 rab3 GTPase-activating protein non-catalytic subunit-like
blastp_kegg lcl|cam:101488739 12 406 + 395 Gaps:11 85.40 459 73.98 0.0 rab3 GTPase-activating protein non-catalytic subunit-like
blastp_kegg lcl|cit:102621485 6 406 + 401 Gaps:11 86.53 453 73.98 0.0 rab3 GTPase-activating protein non-catalytic subunit-like
blastp_uniprot_sprot sp|Q9H2M9|RBGPR_HUMAN 97 406 + 310 Gaps:46 23.40 1393 30.67 1e-22 Rab3 GTPase-activating protein non-catalytic subunit OS Homo sapiens GN RAB3GAP2 PE 1 SV 1
blastp_uniprot_sprot sp|Q5U1Z0|RBGPR_RAT 97 406 + 310 Gaps:47 23.45 1386 30.15 2e-22 Rab3 GTPase-activating protein non-catalytic subunit OS Rattus norvegicus GN Rab3gap2 PE 1 SV 2
blastp_uniprot_sprot sp|Q8BMG7|RBGPR_MOUSE 97 406 + 310 Gaps:47 23.79 1366 29.85 3e-22 Rab3 GTPase-activating protein non-catalytic subunit OS Mus musculus GN Rab3gap2 PE 1 SV 2
blastp_uniprot_sprot sp|Q9VKB9|RBGPR_DROME 87 406 + 320 Gaps:54 23.12 1341 25.81 2e-14 Rab3 GTPase-activating protein regulatory subunit OS Drosophila melanogaster GN rab3-GAP PE 1 SV 2
rpsblast_kog gnl|CDD|37938 11 406 + 396 Gaps:19 31.75 1244 50.89 1e-100 KOG2727 KOG2727 KOG2727 Rab3 GTPase-activating protein non-catalytic subunit [Intracellular trafficking secretion and vesicular transport].

5 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 263 287 25 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Pfam 31 406 376 PF14655 none Rab3 GTPase-activating protein regulatory subunit N-terminus none
PANTHER 14 407 394 PTHR12472 none none IPR026059
Phobius 1 262 262 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 288 411 124 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none

0 Localization

15 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran2_2014_nSecLBD_3P Qrob_Chr08 8 s_1BN2OD_551 s_1B5AYF_599 17,17 0 43,51 lod 1,9229 4,4
Bourran2_2014_rEpiBC*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 35,77 14,11 55,31 lod 2,9413 6,2
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6
Bourran2_2014_aSeqBC_A4 Qrob_Chr08 8 v_15999_278 v_AP13YL15_395 32,52 4,22 57,22 lod 2,7561 6,7
Bourran2_2014_nFork*_A4 Qrob_Chr08 8 PIE175 s_1CD7GJ_1398 31,22 5,24 57,24 lod 2,6724 6,8
Bourran2_2014_nLBD*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,25 0 35,55 lod 2,5951 6
Bourran2_2014_nP*_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,19 0 31,97 lod 2,8472 6
Bourran2_2014_nPriLBD_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,36 0 30,43 lod 2,5806 5,1
Bourran2_2014_nPriLBD_A4 Qrob_Chr08 8 PIE175 v_9164_159 31,85 15,39 48,29 lod 2,8308 6,8
Bourran2_2015_rEpiBC_3P Qrob_Chr08 8 s_A9TNV_543 v_11837_70 9,93 9,83 11,15 lod 3.3 7.3
Champenoux_2015_nSeqBC_A4 Qrob_Chr08 8 v_AD7YD13_501 s_1A7IED_780 43,44 43,42 43,99 lod 3.7 8.9
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL3_d13Cf Qrob_Chr08 8 v_5216_549 v_11625_20 37.08 12,26 54,9 lod 6.5888 0.04
Bourran2_2014_nEpis*_3P Qrob_Chr08 8 s_1DA4QW_688 s_1DNI7D_820 17,96 0 37,75 lod 2,9745 7,5
Bourran2_2014_nPriBD_3P Qrob_Chr11 11 v_11486_194 s_1AT3E_2335 5,54 0,4 20,6 lod 2,6345 5,9

0 Targeting